RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 NR4A2P43354 598 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 MAGEA4P43358 317 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 GSTM5P46439 218 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 PDLIM4P50479 330 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 UAP1Q16222 522 aaPredicted RBP11.86□□□□□ -0.51
CCDC59-202ENST00000547758 CR1LQ2VPA4 569 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 ZNF544Q6NX49 715 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 KLHL17Q6TDP4 642 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 MISPQ8IVT2 679 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.86□□□□□ -0.51
CCDC59-202ENST00000547758 B4GALNT2Q8NHY0 566 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 CDC26Q8NHZ8 85 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 GPR151Q8TDV0 419 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 C3orf49Q96BT1 292 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 AMDHD1Q96NU7 426 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 PSD2Q9BQI7 771 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 ERP44Q9BS26 406 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 COQ10BQ9H8M1 238 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 EQTNQ9NQ60 294 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 MIEF1Q9NQG6 463 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 GRHL1Q9NZI5 618 aa11.86□□□□□ -0.51
CCDC59-202ENST00000547758 ING1Q9UK53 422 aaPredicted RBP11.86□□□□□ -0.51
CCDC59-202ENST00000547758 IGHV3-15A0A0B4J1V0 119 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 NDUFS8O00217 210 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 RGS14O43566 566 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 EFNA2O43921 213 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 TGFAP01135 160 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 ANXA4P09525 319 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-202ENST00000547758 EDNRAP25101 427 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 PRIM2P49643 509 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 ZNF83P51522 516 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 CHRNB3Q05901 458 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 ZNF763Q0D2J5 394 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 C2orf80Q0P641 193 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 RASA2Q15283 850 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 TMEM176BQ3YBM2 270 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-202ENST00000547758 ARL13AQ5H913 290 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-202ENST00000547758 GALNT18Q6P9A2 607 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 BHLHB9Q6PI77 547 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 DEPDC4Q8N2C3 294 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 MMGT1Q8N4V1 131 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 ZNF433Q8N7K0 673 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-202ENST00000547758 OR52N5Q8NH56 324 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 FAM110BQ8TC76 370 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 ZFP90Q8TF47 636 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 HOXB13Q92826 284 aaPredicted RBP11.85□□□□□ -0.51
CCDC59-202ENST00000547758 INPP5KQ9BT40 448 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 C1QTNF3Q9BXJ4 246 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 PMF1-BGLAPU3KQ54 211 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 TGP01266 2768 aa11.85□□□□□ -0.51
CCDC59-202ENST00000547758 IGHV4-61A0A0C4DH41 118 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 KIF2AO00139 706 aaPredicted RBP11.84□□□□□ -0.51
CCDC59-202ENST00000547758 SCDO00767 359 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 ZNF195O14628 629 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 ULK1O75385 1050 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 RAD51DO75771 328 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 NKX2-2O95096 273 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 IFI6P09912 130 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 HPGDP15428 266 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 HMOX2P30519 316 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 HSD17B3P37058 310 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 MAP3K8P41279 467 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 HTR6P50406 440 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 CLCQ05315 142 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 BTKQ06187 659 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 CD226Q15762 336 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 VPS26BQ4G0F5 336 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 ZAR1Q86SH2 424 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 FBXO27Q8NI29 283 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 ZNF300Q96RE9 604 aaPredicted RBP11.84□□□□□ -0.51
CCDC59-202ENST00000547758 TAS2R7Q9NYW3 318 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 SLC25A15Q9Y619 301 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 FKBP7Q9Y680 259 aa11.84□□□□□ -0.51
CCDC59-202ENST00000547758 A0A1W2PQD3 144 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 A8MT66 165 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 C9JVG2 144 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 M0R1B8 84 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 KCNK2O95069 426 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 PRPS2P11908 318 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 PAFAH1B1P43034 410 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 MAGEA12P43365 314 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 PLTPP55058 493 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 RAC3P60763 192 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 ZNF117Q03924 483 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 CHRNEQ04844 493 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 RASGEF1BQ0VAM2 473 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 FAM174BQ3ZCQ3 159 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 FAM71E1Q6IPT2 247 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 ZNF100Q8IYN0 542 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 ATP6V1C2Q8NEY4 427 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 OR6Y1Q8NGX8 325 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 METTL6Q8TCB7 284 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 ZMYND19Q96E35 227 aaPredicted RBP11.83□□□□□ -0.52
CCDC59-202ENST00000547758 MRPL57Q9BQC6 102 aaKnown RBP11.83□□□□□ -0.52
CCDC59-202ENST00000547758 TRMOQ9BU70 441 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 MRPL46Q9H2W6 279 aaKnown RBP11.83□□□□□ -0.52
CCDC59-202ENST00000547758 MYNNQ9NPC7 610 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 UBQLN4Q9NRR5 601 aa11.83□□□□□ -0.52
CCDC59-202ENST00000547758 SIRT5Q9NXA8 310 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms