RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 EIF1P41567 113 aaKnown RBP11.91□□□□□ -0.5
CPSF6-204ENST00000547486 P2RX1P51575 399 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 CASP9P55211 416 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF844Q08AG5 666 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 MPP2Q14168 576 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 CHI3L2Q15782 390 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 PDCD2Q16342 344 aaPredicted RBP11.91□□□□□ -0.5
CPSF6-204ENST00000547486 TMEM176BQ3YBM2 270 aaPredicted RBP11.91□□□□□ -0.5
CPSF6-204ENST00000547486 OR4F3Q6IEY1 312 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 C6orf120Q7Z4R8 191 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF781Q8N8C0 355 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF527Q8NB42 609 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ATP6V1C2Q8NEY4 427 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 SFXN5Q8TD22 340 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ABHD3Q8WU67 409 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 C12orf49Q9H741 205 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 AKTIPQ9H8T0 292 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 GLRX2Q9NS18 164 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ASIC5Q9NY37 505 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 DTNAQ9Y4J8 743 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 ACTL7BQ9Y614 415 aa11.91□□□□□ -0.5
CPSF6-204ENST00000547486 CENPVL1A0A0U1RR11 272 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 GTPBP1O00178 669 aaKnown RBP11.9□□□□□ -0.5
CPSF6-204ENST00000547486 SCN2BO60939 215 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 SOX30O94993 753 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 NUDT14O95848 222 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 TUBBP07437 444 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 KRT16P08779 473 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 MATN1P21941 496 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 ADH6P28332 368 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 ABCE1P61221 599 aaKnown RBP11.9□□□□□ -0.5
CPSF6-204ENST00000547486 PHC1P78364 1004 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 ZNF239Q16600 458 aaKnown RBP11.9□□□□□ -0.5
CPSF6-204ENST00000547486 KRTAP21-3Q3LHN1 58 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 NUFIP2Q7Z417 695 aaKnown RBP11.9□□□□□ -0.5
CPSF6-204ENST00000547486 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
CPSF6-204ENST00000547486 MREGQ8N565 214 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 RFWD2Q8NHY2 731 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 RNF128Q8TEB7 428 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 MOAP1Q96BY2 351 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 ARSGQ96EG1 525 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 C18orf12Q96KH6 178 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 SORT1Q99523 831 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 PIP5K1AQ99755 562 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 PARD6BQ9BYG5 372 aa11.9□□□□□ -0.5
CPSF6-204ENST00000547486 NOP53Q9NZM5 478 aaKnown RBP11.9□□□□□ -0.5
CPSF6-204ENST00000547486 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-204ENST00000547486 H3BNH8 94 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 SMPD2O60906 423 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 PLAUP00749 431 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 C1QCP02747 245 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 SERPINE1P05121 402 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 DHRS4L1P0CG22 281 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 ENPP1P22413 925 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 ELK4P28324 431 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 SOAT1P35610 550 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 SUMO3P55854 103 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-204ENST00000547486 MAD2L1Q13257 205 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-204ENST00000547486 TSC22D1Q15714 1073 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 GPR68Q15743 365 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 KRT71Q3SY84 523 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 PDZK1Q5T2W1 519 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 SHEQ5VZ18 495 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 GTF2IRD2BQ6EKJ0 949 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 BEND4Q6ZU67 534 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 Q71RC1 249 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-204ENST00000547486 GTF2IRD2Q86UP8 949 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 TUSC5Q8IXB3 177 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF614Q8N883 585 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 OR5W2Q8NH69 310 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 PPP1R14CQ8TAE6 165 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 PIGTQ969N2 578 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 CCL19Q99731 98 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 COQ10BQ9H8M1 238 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 ING1Q9UK53 422 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-204ENST00000547486 MKLN1Q9UL63 735 aa11.89□□□□□ -0.51
CPSF6-204ENST00000547486 GPC6Q9Y625 555 aaPredicted RBP11.89□□□□□ -0.51
CPSF6-204ENST00000547486 UQCRHLA0A096LP55 91 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 IGHV3-15A0A0B4J1V0 119 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 A0A1W2PNR3 127 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 SERINC4A6NH21 518 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ETV2O00321 342 aaPredicted RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 RNASET2O00584 256 aaKnown RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ANKRD28O15084 1053 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 BIRC5O15392 142 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 RGS16O15492 202 aaPredicted RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 ZNF264O43296 627 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 EIF4E2O60573 245 aaKnown RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 DNAJA2O60884 412 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 GCM2O75603 506 aaPredicted RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 UGT2B17O75795 530 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 INHBBP09529 407 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 PPP3CBP16298 524 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 PSMB1P20618 241 aaKnown RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 FPR1P21462 350 aa11.88□□□□□ -0.51
CPSF6-204ENST00000547486 RPL14P50914 215 aaKnown RBP11.88□□□□□ -0.51
CPSF6-204ENST00000547486 QPRTQ15274 297 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms