RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 VMACQ2NL98 169 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 TMEM44Q2T9K0 475 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 PLPPR5Q32ZL2 321 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 RNF220Q5VTB9 566 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 VASNQ6EMK4 673 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF836Q6ZNA1 936 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 TMCO5AQ8N6Q1 288 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 FAM57AQ8TBR7 257 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CNOT9Q92600 299 aaKnown RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 SARAFQ96BY9 339 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 RSPO3Q9BXY4 272 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 DNAJB12Q9NXW2 375 aaKnown RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF232Q9UNY5 417 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 USP22Q9UPT9 525 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CHST2Q9Y4C5 530 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 COL12A1Q99715 3063 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CDHR4A6H8M9 788 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 NME4O00746 187 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 GCM2O75603 506 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CYP7B1O75881 506 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 LINGO3P0C6S8 592 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 BMP7P18075 431 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 AQP1P29972 269 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 PSME3P61289 254 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CBFBQ13951 182 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 KRT73Q86Y46 540 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 FBXO27Q8NI29 283 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 PRR7Q8TB68 274 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ABTB1Q969K4 478 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF524Q96C55 264 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 SFXN2Q96NB2 322 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF607Q96SK3 696 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 TIMP4Q99727 224 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 NPAS1Q99742 590 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 UGT2B28Q9BY64 529 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CACYBPQ9HB71 228 aaKnown RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 RLIMQ9NVW2 624 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ABCD2Q9UBJ2 740 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 MYO7BQ6PIF6 2116 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 DIDO1Q9BTC0 2240 aaKnown RBP18.54■□□□□ 0.56
HMGA2-211ENST00000545998 C7orf72A4D263 438 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 FAM220BPB1ANY3 271 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 BCKDKO14874 412 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 NUDT14O95848 222 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ACTL6AO96019 429 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ESRRAP11474 423 aaPredicted RBP18.54■□□□□ 0.56
HMGA2-211ENST00000545998 CHMP24386 653 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 CCR4P51679 360 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 TOMM34Q15785 309 aaPredicted RBP18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ZSWIM7Q19AV6 140 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 EMC4Q5J8M3 183 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF311Q5JNZ3 666 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 DCST1Q5T197 706 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 RAET1LQ5VY80 246 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ERICH5Q6P6B1 374 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 AAGABQ6PD74 315 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 TRPM8Q7Z2W7 1104 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 GRAMD2AQ8IUY3 354 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 OR5M1Q8NGP8 315 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ZBTB8AQ96BR9 441 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 NSL1Q96IY1 281 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 PIGQQ9BRB3 760 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 SPATA5L1Q9BVQ7 753 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 ACAD8Q9UKU7 415 aa18.54■□□□□ 0.56
HMGA2-211ENST00000545998 OR2M5A3KFT3 312 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 SHISA8B8ZZ34 492 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 FAM47E-STBD1D6RA91 191 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 PRRG2O14669 202 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 ADAM11O75078 769 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 TPOP07202 933 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF17P17021 662 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 PRKAR1BP31321 381 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 GCKP35557 465 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 MNAT1P51948 309 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 LIPEQ05469 1076 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 VEZF1Q14119 521 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 C3AR1Q16581 482 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 CD163Q86VB7 1156 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 CLIP4Q8N3C7 705 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 GTPBP8Q8N3Z3 284 aaPredicted RBP18.53■□□□□ 0.56
HMGA2-211ENST00000545998 OR2T12Q8NG77 320 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 PNPLA3Q9NST1 481 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 GMPR2Q9P2T1 348 aaKnown RBP18.53■□□□□ 0.56
HMGA2-211ENST00000545998 TINAGQ9UJW2 476 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 LRRK2Q5S007 2527 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 PCNX1Q96RV3 2341 aa18.53■□□□□ 0.56
HMGA2-211ENST00000545998 ETV2O00321 342 aaPredicted RBP18.52■□□□□ 0.56
HMGA2-211ENST00000545998 SERPINB7O75635 380 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 MFN2O95140 757 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 T-ENOLP0DO92 83 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 CA7P43166 264 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 GXYLT1Q4G148 440 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 INTS11Q5TA45 600 aaKnown RBP18.52■□□□□ 0.56
HMGA2-211ENST00000545998 C1QL3Q5VWW1 255 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 DHRS4L2Q6PKH6 230 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 CCDC80Q76M96 950 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 DOLPP1Q86YN1 238 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 OR5M9Q8NGP3 310 aa18.52■□□□□ 0.56
HMGA2-211ENST00000545998 POC1BQ8TC44 478 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms