RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 GIPRP48546 466 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SGSHP51688 502 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 TMEM52BQ4KMG9 183 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 CCDC58Q4VC31 144 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 PRAMEF8Q5VWM4 474 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 PRAMEF7Q5VXH5 474 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 TMPPEQ6ZT21 453 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 TMPRSS9Q7Z410 1059 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 COMMD7Q86VX2 200 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 EGFL6Q8IUX8 553 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 CLDN22Q8N7P3 220 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 PRRT1Q99946 306 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 RTP3Q9BQQ7 232 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 P2RY12Q9H244 342 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SGK494L7N484 410 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SLC33A1O00400 549 aaPredicted RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 F3P13726 295 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 RGS19P49795 217 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 MRPS21P82921 87 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF100Q8IYN0 542 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 NEURL3Q96EH8 262 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ICKQ9UPZ9 632 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 KCNK5O95279 499 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 AIFM1O95831 613 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 TFP02787 698 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 CAPNS1P04632 268 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 OPRD1P41143 372 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 LSSP48449 732 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 NR0B1P51843 470 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 RPS15P62841 145 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 CAMK2DQ13557 499 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 GALNT11Q8NCW6 608 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SDR9C7Q8NEX9 313 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 OR2M2Q96R28 347 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 MRPL15Q9P015 296 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 IL20RAQ9UHF4 553 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 EFCAB7A8K855 629 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ABLIM3O94929 683 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF35P13682 527 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 TNFSF8P32971 234 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 KIAA0895LQ68EN5 471 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 FAM180BQ6P0A1 224 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 SYNPRQ8TBG9 265 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 TREX2Q9BQ50 279 aaPredicted RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF442Q9H7R0 627 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 UBQLN4Q9NRR5 601 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 DIMT1Q9UNQ2 313 aaKnown RBP11.74□□□□□ -0.53
COL4A6-209ENST00000545689 MOKQ9UQ07 419 aa11.74□□□□□ -0.53
COL4A6-209ENST00000545689 RREB1Q92766 1687 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 GFRA2O00451 464 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 RAB3DO95716 219 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 AKR1C4P17516 323 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 ALDH3B2P48448 385 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 DEFB103AP81534 67 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 GALK2Q01415 458 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 PLK5Q496M5 336 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 ZNF542PQ5EBM4 170 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 VRK2Q86Y07 508 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 DTX3Q8N9I9 347 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 C4orf36Q96KX1 117 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 PRELID1Q9Y255 219 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 LOXHD1Q8IVV2 1947 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 TRIM64CA6NLI5 447 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 TOXO94900 526 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 GPR19Q15760 415 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SYPL1Q16563 259 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 KIAA1211LQ6NV74 962 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 MS4A8Q9BY19 250 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 APMAPQ9HDC9 416 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 CUEDC1Q9NWM3 386 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SLC22A7Q9Y694 548 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 MEIOCA2RUB1 952 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 DEFB110Q30KQ9 67 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 MBOAT2Q6ZWT7 520 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 THAP3Q8WTV1 239 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 INSM2Q96T92 566 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 C19orf43Q9BQ61 176 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 C1QTNF3Q9BXJ4 246 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SACM1LQ9NTJ5 587 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 AXIN1O15169 862 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 ADAM12O43184 909 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 ADAM23O75077 832 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SEC14L2O76054 403 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 GPX2P18283 190 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 PRKAR1BP31321 381 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 MMP12P39900 470 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 OR2T35Q8NGX2 323 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 CHTF18Q8WVB6 975 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 WDR83Q9BRX9 315 aaKnown RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 SPATA6Q9NWH7 488 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 OBP2AQ9NY56 170 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 CPNE7Q9UBL6 633 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 KCNS2Q9ULS6 477 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 UBE2J1Q9Y385 318 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 AK6Q9Y3D8 172 aaKnown RBP11.73□□□□□ -0.53
COL4A6-209ENST00000545689 TAPBPO15533 448 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 PER3P56645 1201 aa11.73□□□□□ -0.53
COL4A6-209ENST00000545689 AFMIDQ63HM1 303 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms