RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SFTPDP35247 375 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 RFX3P48380 749 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 PRIM2P49643 509 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 COMPP49747 757 aaPredicted RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 FABP6P51161 128 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 PLTPP55058 493 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 ZNF763Q0D2J5 394 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 FOXF1Q12946 379 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 STK11Q15831 433 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 TMEM176BQ3YBM2 270 aaPredicted RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 VPS26BQ4G0F5 336 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 C1QTNF12Q5T7M4 302 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 MTERF4Q7Z6M4 381 aaKnown RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 CDRT4Q8N9R6 151 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 FAM76AQ8TAV0 307 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 METTL6Q8TCB7 284 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 ZFAND2BQ8WV99 257 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 C1orf159Q96HA4 380 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 MUS81Q96NY9 551 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 INPP5KQ9BT40 448 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 MRPL46Q9H2W6 279 aaKnown RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 EML4Q9HC35 981 aaKnown RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 MYNNQ9NPC7 610 aa12.95□□□□□ -0.34
RTN3-214ENST00000545432 GPC6Q9Y625 555 aaPredicted RBP12.95□□□□□ -0.34
RTN3-214ENST00000545432 RAD51CO43502 376 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 BMP4P12644 408 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 EGR1P18146 543 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 APOBEC3AP31941 199 aaPredicted RBP12.94□□□□□ -0.34
RTN3-214ENST00000545432 PAFAH1B1P43034 410 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 PDLIM4P50479 330 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 SPOCK1Q08629 439 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 PDK3Q15120 406 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 ZNF678Q5SXM1 525 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 SLC22A25Q6T423 547 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
RTN3-214ENST00000545432 GATSQ8NAP1 163 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 CEP70Q8NHQ1 597 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 FBXO27Q8NI29 283 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 GPR151Q8TDV0 419 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 ZFP90Q8TF47 636 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 ZNF524Q96C55 264 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 PMF1-BGLAPU3KQ54 211 aa12.94□□□□□ -0.34
RTN3-214ENST00000545432 IGKV3D-15A0A087WSY6 115 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 IGHV4-61A0A0C4DH41 118 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 KCNAB3O43448 404 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 HSPA4LO95757 839 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 ACP2P11117 423 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 ZNF23P17027 643 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 PRKCAP17252 672 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 NTSP30990 170 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 FRKP42685 505 aaPredicted RBP12.93□□□□□ -0.34
RTN3-214ENST00000545432 SUMO3P55854 103 aaPredicted RBP12.93□□□□□ -0.34
RTN3-214ENST00000545432 ZNF117Q03924 483 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 CHRNB3Q05901 458 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 RASGEF1BQ0VAM2 473 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 ZSWIM7Q19AV6 140 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 CR1LQ2VPA4 569 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 ZCCHC12Q6PEW1 402 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 KLHL17Q6TDP4 642 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 CBLN3Q6UW01 205 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 GPRIN3Q6ZVF9 776 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 IKBIPQ70UQ0 350 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 MMGT1Q8N4V1 131 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 SLC16A11Q8NCK7 471 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 GPR119Q8TDV5 335 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 SH3YL1Q96HL8 342 aaPredicted RBP12.93□□□□□ -0.34
RTN3-214ENST00000545432 MRGPRX4Q96LA9 322 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 EBPLQ9BY08 206 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 ACSS3Q9H6R3 686 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 CHODLQ9H9P2 273 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 DYSFO75923 2080 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 TENM1Q9UKZ4 2725 aa12.93□□□□□ -0.34
RTN3-214ENST00000545432 MEGF8Q7Z7M0 2845 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 A0A0A6YYJ9 748 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 NPIPB8E9PQR5 432 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 SLCO1B7G3V0H7 640 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 TBX19O60806 448 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 DNAJA2O60884 412 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 LY6HO94772 140 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 TGFAP01135 160 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 APEHP13798 732 aaKnown RBP12.92□□□□□ -0.34
RTN3-214ENST00000545432 IMPDH1P20839 514 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 P2RX1P51575 399 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 TOMM34Q15785 309 aaPredicted RBP12.92□□□□□ -0.34
RTN3-214ENST00000545432 DUSP5Q16690 384 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 KLHL26Q53HC5 615 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 FBXW9Q5XUX1 488 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 C12orf54Q6X4T0 127 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 DEF8Q6ZN54 512 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 ZNF551Q7Z340 670 aaPredicted RBP12.92□□□□□ -0.34
RTN3-214ENST00000545432 CEP112Q8N8E3 955 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 MRRFQ96E11 262 aaKnown RBP12.92□□□□□ -0.34
RTN3-214ENST00000545432 FOXN4Q96NZ1 517 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 ZNF300Q96RE9 604 aaPredicted RBP12.92□□□□□ -0.34
RTN3-214ENST00000545432 SOX7Q9BT81 388 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 MYOZ1Q9NP98 299 aaPredicted RBP12.92□□□□□ -0.34
RTN3-214ENST00000545432 MIEF1Q9NQG6 463 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 GIN1Q9NXP7 522 aa12.92□□□□□ -0.34
RTN3-214ENST00000545432 IGHV3-15A0A0B4J1V0 119 aa12.91□□□□□ -0.34
RTN3-214ENST00000545432 LOC390937A0A1W2PQ73 354 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms