RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ARGFXA6NJG6 315 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 MAN1A2O60476 641 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 TPST2O60704 377 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ALPLP05186 524 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 PRKAR1AP10644 381 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ANXA8P13928 327 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 CDH2P19022 906 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 PRKACGP22612 351 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 IGFBP5P24593 272 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ELAVL4P26378 380 aaKnown RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 HTR2AP28223 471 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 CASRP41180 1078 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ACAA2P42765 397 aaKnown RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ZNF117Q03924 483 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 C17orf67Q0P5P2 114 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 RFX4Q33E94 735 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ATP1A1-AS1Q5TC04 95 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ABHD17BQ5VST6 288 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 TBPL2Q6SJ96 375 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 RTL4Q6ZR62 310 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 RRM2BQ7LG56 351 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 GDF7Q7Z4P5 450 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 CADM2Q8N3J6 435 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ZNF248Q8NDW4 579 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 SH3YL1Q96HL8 342 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 RDH12Q96NR8 316 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 OSBPL11Q9BXB4 747 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 Q9H521 79 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 ZNF556Q9HAH1 456 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 SMURF2Q9HAU4 748 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 KRCC1Q9NPI7 259 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 SMPD3Q9NY59 655 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 PPP4R1LQ9P1A2 415 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 POLHQ9Y253 713 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 MSRB2Q9Y3D2 182 aa12.61□□□□□ -0.39
SCARB1-209ENST00000545305 MAGED1Q9Y5V3 778 aaPredicted RBP12.61□□□□□ -0.39
SCARB1-209ENST00000545305 A0A1B0GWA3 101 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 SH3PXD2BA1X283 911 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 OIP5O43482 229 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 OR10H3O60404 316 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 NUDT14O95848 222 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 PGCP20142 388 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 ITPKBP27987 946 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 IFNGR2P38484 337 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 P2RX1P51575 399 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 RAD23AP54725 363 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 UGT2B15P54855 530 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 SUMO3P55854 103 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 PPP2R2BQ00005 443 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 CDC20Q12834 499 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 SRSF6Q13247 344 aaKnown RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 CBFBQ13951 182 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 TAF11Q15544 211 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 CRTC2Q53ET0 693 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 B3GNTL1Q67FW5 361 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 PODNL1Q6PEZ8 512 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 ZNF730Q6ZMV8 503 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 TSPYL5Q86VY4 417 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 CYP4Z2PQ8N1L4 340 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 LSMEM1Q8N8F7 131 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 B4GALNT2Q8NHY0 566 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 ZNF563Q8TA94 476 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 RNF138Q8WVD3 245 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 DNAJA4Q8WW22 397 aaPredicted RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 FAM122AQ96E09 287 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 SGCZQ96LD1 299 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 ZNF597Q96LX8 424 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 BARD1Q99728 777 aaKnown RBP12.6□□□□□ -0.39
SCARB1-209ENST00000545305 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 KRT84Q9NSB2 600 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 MAN2C1Q9NTJ4 1040 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 C15orf41Q9Y2V0 281 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 WIF1Q9Y5W5 379 aa12.6□□□□□ -0.39
SCARB1-209ENST00000545305 A0A0B4J2E0 115 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 A0A1B0GX12 115 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 NKX2-8O15522 239 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 CHP2O43745 196 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 IDH2P48735 452 aaKnown RBP12.59□□□□□ -0.39
SCARB1-209ENST00000545305 HLCSP50747 726 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 IL1RL1Q01638 556 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 SNTA1Q13424 505 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 ALG10BQ5I7T1 473 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 SWT1Q5T5J6 900 aaKnown RBP12.59□□□□□ -0.39
SCARB1-209ENST00000545305 WLSQ5T9L3 541 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 WBP2NLQ6ICG8 309 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 SLC30A6Q6NXT4 461 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 FAHD1Q6P587 224 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 TMEM81Q6P7N7 255 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 ULK3Q6PHR2 472 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 APLFQ8IW19 511 aaPredicted RBP12.59□□□□□ -0.39
SCARB1-209ENST00000545305 BEST3Q8N1M1 668 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 GALNT16Q8N428 558 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 AQP11Q8NBQ7 271 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 OR4K5Q8NGD3 323 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 OR9Q2Q8NGE9 314 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 PIGXQ8TBF5 258 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 SLC7A13Q8TCU3 470 aa12.59□□□□□ -0.39
SCARB1-209ENST00000545305 DUSP19Q8WTR2 217 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms