RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 NPIPB9F8W1W9 429 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 SEC14L5O43304 696 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 PRAMEF2O60811 474 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 PTP4A3O75365 173 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 CSF2P04141 144 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 MAKP20794 623 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 PAICSP22234 425 aaKnown RBP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 PTBP1P26599 531 aaKnown RBP eCLIP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 FXYD6P3P58550 94 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 C22orf42Q6IC83 251 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 FIGNL1Q6PIW4 674 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 ZNF322Q6U7Q0 402 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 CPOQ8IVL8 374 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 ACBD7Q8N6N7 88 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 ZBTB8BQ8NAP8 495 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 C7orf57Q8NEG2 295 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 FAM83FQ8NEG4 500 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 RIT1Q92963 219 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 RBM18Q96H35 190 aaKnown RBP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 DPH1Q9BZG8 443 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 FBXO34Q9NWN3 711 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 HAO2Q9NYQ3 351 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 PLEKHB1Q9UF11 243 aaPredicted RBP16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 SLC35A3Q9Y2D2 325 aa16.69■□□□□ 0.26
TNFAIP1-202ENST00000544907 TECTAO75443 2155 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 GXYLT2A0PJZ3 443 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 TMEM221A6NGB7 291 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 M0R296 226 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 NTN1O95631 604 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 CH25HO95992 272 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 GKN3PP0CG01 181 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 CHRNB1P11230 501 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 NME1P15531 152 aaKnown RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 HSD17B7P56937 341 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 PPP1CAP62136 330 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 RPS25P62851 125 aaKnown RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 PLAURQ03405 335 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 SLC13A2Q13183 592 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 GAS6Q14393 721 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 CRTC2Q53ET0 693 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 DDI2Q5TDH0 399 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 LINC00114Q6XXX2 140 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 C17orf82Q86X59 251 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 GKN2Q86XP6 184 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 GDPD1Q8N9F7 314 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 DNAJA4Q8WW22 397 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 SECISBP2Q96T21 854 aaKnown RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 RAB33BQ9H082 229 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 DNAJB12Q9NXW2 375 aaKnown RBP16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 NPAP1Q9NZP6 1156 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 EPHA6Q9UF33 1036 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 PCDHGB2Q9Y5G2 931 aa16.68■□□□□ 0.26
TNFAIP1-202ENST00000544907 EFCAB7A8K855 629 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 RGS5O15539 181 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 AQP9O43315 295 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 HRO43593 1189 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 FOXS1O43638 330 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 TYRP1P17643 537 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 GTF2E2P29084 291 aaKnown RBP16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 ATP6V1E1P36543 226 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 ACAA2P42765 397 aaKnown RBP16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 SEPHS1P49903 392 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 FOXK2Q01167 660 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 STX4Q12846 297 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 FGFBP1Q14512 234 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 TRAM1Q15629 374 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 GLYR1Q49A26 553 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 TCTE1Q5JU00 501 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 XKRXQ6PP77 449 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 METAP1DQ6UB28 335 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 ZNF438Q7Z4V0 828 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 OR4F15Q8NGB8 312 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 KATNB1Q9BVA0 655 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 POLE4Q9NR33 117 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 PLCL2Q9UPR0 1127 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 CSNK1G3Q9Y6M4 447 aa16.67■□□□□ 0.26
TNFAIP1-202ENST00000544907 FITM1A5D6W6 292 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 SLC9B1P1A6NJY1 282 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 HCRTR1O43613 425 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 IGF2P01344 180 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 IMPDH2P12268 514 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 CD27P26842 260 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 GABRA4P48169 554 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 FABP5Q01469 135 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 FUT7Q11130 342 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 POU4F2Q12837 409 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 ZNF542PQ5EBM4 170 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 ULK3Q6PHR2 472 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 RTL4Q6ZR62 310 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 LHFPL3Q86UP9 236 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 SFTPA2Q8IWL1 248 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 GPALPP1Q8IXQ4 340 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 ZNF687Q8N1G0 1237 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 TSTD1Q8NFU3 115 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 PFN4Q8NHR9 129 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 SRRQ9GZT4 340 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 Q9N2J8 555 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 C20orf141Q9NUB4 165 aa16.66■□□□□ 0.26
TNFAIP1-202ENST00000544907 GRIP1Q9Y3R0 1128 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms