RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CASP12Q6UXS9 341 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 ZNF517Q6ZMY9 492 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-218ENST00000543939 GPR141Q7Z602 305 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 IQCF1Q8N6M8 205 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 WDR36Q8NI36 951 aaKnown RBP18.21■□□□□ 0.51
COPS7A-218ENST00000543939 TRUB1Q8WWH5 349 aaKnown RBP18.21■□□□□ 0.51
COPS7A-218ENST00000543939 MR1Q95460 341 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 MPP4Q96JB8 637 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 HS6ST2Q96MM7 605 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 SIGLEC11Q96RL6 698 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 LPAR4Q99677 370 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 TUBA1CQ9BQE3 449 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 ZNF426Q9BUY5 554 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 VCX3AQ9NNX9 186 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 TMEM9BQ9NQ34 198 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 GPN3Q9UHW5 284 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-218ENST00000543939 PSORS1C1Q9UIG5 152 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 PCDHGB1Q9Y5G3 927 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 EXPH5Q8NEV8 1989 aa18.21■□□□□ 0.51
COPS7A-218ENST00000543939 ITIH1P19827 911 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 PTNP21246 168 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 PCMT1P22061 227 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 ABCD3P28288 659 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 PNLIPRP2P54317 469 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 E2F1Q01094 437 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 RAB39AQ14964 217 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CNPY1Q3B7I2 92 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 ACSM5Q6NUN0 579 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 KIRREL2Q6UWL6 708 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 LINC00114Q6XXX2 140 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 HSDL2Q6YN16 418 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 GATSQ8NAP1 163 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 OR8D4Q8NGM9 314 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 PFN4Q8NHR9 129 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 TEX47Q8TBZ9 253 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 RNF217Q8TC41 542 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 VMP1Q96GC9 406 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 EXOSC3Q9NQT5 275 aaKnown RBP18.2■□□□□ 0.5
COPS7A-218ENST00000543939 FKBP14Q9NWM8 211 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 C19orf25Q9UFG5 118 aaPredicted RBP18.2■□□□□ 0.5
COPS7A-218ENST00000543939 LOXL2Q9Y4K0 774 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 SH3D21A4FU49 640 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CDC42EP2O14613 210 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 OIP5O43482 229 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 RGS10O43665 173 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 NGFRP08138 427 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 UBL4AP11441 157 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 TTKP33981 857 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 ETV5P41161 510 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 RBM34P42696 430 aaKnown RBP18.2■□□□□ 0.5
COPS7A-218ENST00000543939 SMSP52788 366 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 INSM1Q01101 510 aaPredicted RBP18.2■□□□□ 0.5
COPS7A-218ENST00000543939 SKP2Q13309 424 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CCDC157Q569K6 752 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 ALG10BQ5I7T1 473 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 TMEM201Q5SNT2 666 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 ULK3Q6PHR2 472 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 AHSA2Q719I0 299 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 MRGPREQ86SM8 312 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 LSRQ86X29 649 aaPredicted RBP18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CADM2Q8N3J6 435 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CLDN22Q8N7P3 220 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 NUBPLQ8TB37 319 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 PHOSPHO1Q8TCT1 267 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 PHOX2BQ99453 314 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 STRADBQ9C0K7 418 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CCDC90BQ9GZT6 254 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 LIN28AQ9H9Z2 209 aaKnown RBP18.2■□□□□ 0.5
COPS7A-218ENST00000543939 C20orf141Q9NUB4 165 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 CLN6Q9NWW5 311 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 IL20Q9NYY1 176 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 MED31Q9Y3C7 131 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 B3GALT1Q9Y5Z6 326 aa18.2■□□□□ 0.5
COPS7A-218ENST00000543939 WDR87Q6ZQQ6 2873 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 RFPL3O75679 317 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 MT-ND2P03891 347 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 IFI30P13284 250 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 MAKP20794 623 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 NUDT6P53370 316 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 CTBP2P56545 445 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 SLC26A5P58743 744 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 SPEM2Q0P670 501 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 GTF2IRD2BQ6EKJ0 949 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 ZNF620Q6ZNG0 422 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 PRSS48Q7RTY5 328 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 GTF2IRD2Q86UP8 949 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 OR8J1Q8NGP2 316 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 GGHQ92820 318 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 C8orf44Q96CB5 159 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 IL4I1Q96RQ9 567 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 POLDIP3Q9BY77 421 aaKnown RBP18.19■□□□□ 0.5
COPS7A-218ENST00000543939 MEPEQ9NQ76 525 aaPredicted RBP18.19■□□□□ 0.5
COPS7A-218ENST00000543939 RPS6KB2Q9UBS0 482 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 TMEM5Q9Y2B1 443 aa18.19■□□□□ 0.5
COPS7A-218ENST00000543939 TEX51A0A1B0GUA7 166 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 A0A1W2PQD3 144 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 UNC119BA6NIH7 251 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 CLCA1A8K7I4 914 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 C9J4A7 227 aa18.18■□□□□ 0.5
COPS7A-218ENST00000543939 TMX2-CTNND1H3BSU7 103 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms