RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	MUC13	Q9H3R2	512 aa		9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	GORASP2	Q9H8Y8	452 aa		9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	DNAJB12	Q9NXW2	375 aa	Known RBP	9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	ACTR3B	Q9P1U1	418 aa		9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	NPIPA1	Q9UND3	350 aa		9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	SAMD4A	Q9UPU9	718 aa	Known RBP	9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	SLC9A8	Q9Y2E8	581 aa		9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	RPH3A	Q9Y2J0	694 aa	Predicted RBP	9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	C15orf41	Q9Y2V0	281 aa		9.25	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZFHX4	Q86UP3	3567 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	IGLV3-32	A0A0A0MS00	114 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	ANKUB1	A6NFN9	424 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545		M0R3H8	397 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	SYT5	O00445	386 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	GLS	O94925	669 aa	Predicted RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	LGI1	O95970	557 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	C8B	P07358	591 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	GP1BB	P13224	206 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	PGC	P20142	388 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	CD247	P20963	164 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	GCK	P35557	465 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	MAGEA5	P43359	124 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	SUMO3	P55854	103 aa	Predicted RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	DSCR4	P56555	118 aa	Predicted RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	HOXC5	Q00444	222 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	SKP2	Q13309	424 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	ELOA	Q14241	798 aa	Known RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	FLOT2	Q14254	428 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	RNFT1	Q5M7Z0	435 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	C1orf146	Q5VVC0	180 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	RAET1L	Q5VY80	246 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	ARSK	Q6UWY0	536 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	CBLL1	Q75N03	491 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	SPATA24	Q86W54	205 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	CADM2	Q8N3J6	435 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	FAM109A	Q8N4B1	249 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	FADS6	Q8N9I5	356 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545		Q8NA96	180 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	GPR32P1	Q8NGA4	272 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	RNF217	Q8TC41	542 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	ASB9	Q96DX5	294 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	C1GALT1C1	Q96EU7	318 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	HSH2D	Q96JZ2	352 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	RAB3IP	Q96QF0	476 aa	Predicted RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	EXOSC3	Q9NQT5	275 aa	Known RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	AGPAT4	Q9NRZ5	378 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	DCAF13	Q9NV06	445 aa	Known RBP	9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	OLAH	Q9NV23	265 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	MED17	Q9NVC6	651 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	TAS2R10	Q9NYW0	307 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	RPS6KB2	Q9UBS0	482 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	SLC7A8	Q9UHI5	535 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	ANAPC2	Q9UJX6	822 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	ICAM5	Q9UMF0	924 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	POMP	Q9Y244	141 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	VDAC3	Q9Y277	283 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	HRH3	Q9Y5N1	445 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	DOCK10	Q96BY6	2186 aa		9.24	□□□□□ -0.93
CPSF7-221	ENST00000543545	EPG5	Q9HCE0	2579 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	DSP	P15924	2871 aa	Known RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545		A0A087WZY1	265 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	AP3D1	O14617	1153 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	ADAM10	O14672	748 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	PRKD3	O94806	890 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	CELA3A	P09093	270 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	PRG2	P13727	222 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	TNFRSF1B	P20333	461 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	ATP6V1B2	P21281	511 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	SRD5A2	P31213	254 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	OR1E2	P47887	323 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	IDH2	P48735	452 aa	Known RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	ERF	P50548	548 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	CRYBA2	P53672	197 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	EPS8	Q12929	822 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	FOXD4	Q12950	439 aa	Predicted RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	GANAB	Q14697	944 aa	Known RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	QPRT	Q15274	297 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	TOMM34	Q15785	309 aa	Predicted RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	FXN	Q16595	210 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	HYAL4	Q2M3T9	481 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	IFI44L	Q53G44	452 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	MTX3	Q5HYI7	312 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	WIPI1	Q5MNZ9	446 aa	Predicted RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	DEF8	Q6ZN54	512 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZNF771	Q7L3S4	317 aa	Predicted RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	VTCN1	Q7Z7D3	282 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	RANBP3L	Q86VV4	465 aa	Predicted RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	CARM1	Q86X55	608 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	GRAMD2A	Q8IUY3	354 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	FAM83F	Q8NEG4	500 aa	Predicted RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	OR52E4	Q8NGH9	312 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	OR5M1	Q8NGP8	315 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	GPR119	Q8TDV5	335 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	TMEM234	Q8WY98	164 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	NTNG2	Q96CW9	530 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	SNRNP40	Q96DI7	357 aa	Known RBP	9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	PYURF	Q96I23	114 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	SFXN2	Q96NB2	322 aa		9.23	□□□□□ -0.93
CPSF7-221	ENST00000543545	ZNF703	Q9H7S9	590 aa	Predicted RBP	9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms