RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 MIPOL1Q8TD10 442 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 EFHD2Q96C19 240 aaPredicted RBP4.64□□□□□ -1.67
MDM2-230ENST00000543323 FBXO17Q96EF6 278 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 PRICKLE1Q96MT3 831 aaPredicted RBP4.64□□□□□ -1.67
MDM2-230ENST00000543323 AGAP3Q96P47 875 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 CHP1Q99653 195 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 CITED1Q99966 193 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 TRIM62Q9BVG3 475 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 UPF3AQ9H1J1 476 aaKnown RBP4.64□□□□□ -1.67
MDM2-230ENST00000543323 VCPKMTQ9H867 229 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 AMBNQ9NP70 447 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 EXOSC3Q9NQT5 275 aaKnown RBP4.64□□□□□ -1.67
MDM2-230ENST00000543323 WRAP73Q9P2S5 460 aaPredicted RBP4.64□□□□□ -1.67
MDM2-230ENST00000543323 KIAA1257Q9ULG3 409 aa4.64□□□□□ -1.67
MDM2-230ENST00000543323 USP6P35125 1406 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.63□□□□□ -1.67
MDM2-230ENST00000543323 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.63□□□□□ -1.67
MDM2-230ENST00000543323 A0A1W2PPE3 182 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 SAGE2PA6NJ88 616 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 ACOD1A6NK06 481 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 GOLGA8SH3BPF8 625 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 HAS3O00219 553 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 WRBO00258 174 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 ABCD4O14678 606 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 IDH3BO43837 385 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 RAMP3O60896 148 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 SEMA4FO95754 770 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 ATP1B2P14415 290 aaPredicted RBP4.63□□□□□ -1.67
MDM2-230ENST00000543323 LMO2P25791 158 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 CASP14P31944 242 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 CD80P33681 288 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 NF2P35240 595 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 CSRP3P50461 194 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 PPP1R7Q15435 360 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 C17orf58Q2M2W7 97 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 TEX44Q53QW1 395 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 VWA2Q5GFL6 755 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 XKR7Q5GH72 579 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 SPANXN2Q5MJ10 180 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 OTUD3Q5T2D3 398 aaPredicted RBP4.63□□□□□ -1.67
MDM2-230ENST00000543323 MEDAGQ5VYS4 303 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 RFWD3Q6PCD5 774 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 UQCC3Q6UW78 93 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 TPRA1Q86W33 373 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 CATSPER3Q86XQ3 398 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 PSTKQ8IV42 348 aaKnown RBP4.63□□□□□ -1.67
MDM2-230ENST00000543323 KLHDC8BQ8IXV7 354 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 CEP112Q8N8E3 955 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 OR2T33Q8NG76 320 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 OR4D9Q8NGE8 314 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 OR9A4Q8NGU2 314 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 SLC22A8Q8TCC7 542 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 MCUR1Q96AQ8 359 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 RHBGQ9H310 441 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 ZNF696Q9H7X3 374 aa4.63□□□□□ -1.67
MDM2-230ENST00000543323 IGLV7-46A0A075B6I9 117 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 OR2AG2A6NM03 316 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ZNF432O94892 652 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 AP2A1O95782 977 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 KRT6AP02538 564 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 HMGB2P26583 209 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 GCAP28676 217 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 GYG1P46976 350 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 GSK3BP49841 420 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ACY1Q03154 408 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ST3GAL3Q11203 375 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 LY6DQ14210 128 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 GK3PQ14409 553 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 KLHL38Q2WGJ6 581 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 TMEM30BQ3MIR4 351 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 C1orf220Q5T0J3 134 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 RAET1LQ5VY80 246 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ZNF57Q68EA5 555 aaPredicted RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 EMBQ6PCB8 327 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 TMEM107Q6UX40 140 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ANGPTL8Q6UXH0 198 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 BZW1Q7L1Q6 419 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 LRRTM1Q86UE6 522 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 FGFRL1Q8N441 504 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 Q8NBF4 154 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 TRUB1Q8WWH5 349 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 STARD8Q92502 1023 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 GTF3AQ92664 365 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 ZNF75CPQ92670 426 aaPredicted RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 TIMD4Q96H15 378 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 TMEM80Q96HE8 168 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ART5Q96L15 291 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ATF6BQ99941 703 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 SLC35A5Q9BS91 424 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 CCDC28BQ9BUN5 200 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 PNNQ9H307 717 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 PPDPFQ9H3Y8 114 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 KLHL28Q9NXS3 571 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 NUDT4Q9NZJ9 180 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 PRPF19Q9UMS4 504 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 ABCG2Q9UNQ0 655 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 RNF24Q9Y225 148 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 MRPL11Q9Y3B7 192 aaKnown RBP4.62□□□□□ -1.67
MDM2-230ENST00000543323 USP16Q9Y5T5 823 aa4.62□□□□□ -1.67
MDM2-230ENST00000543323 ZNF840PA6NDX5 716 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms