RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SERPINA12Q8IW75 414 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 ZNF480Q8WV37 535 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 ZBTB8AQ96BR9 441 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 KCNJ16Q9NPI9 418 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 MED17Q9NVC6 651 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 SUSD2Q9UGT4 822 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 GABRPO00591 440 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 SEMA4FO95754 770 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 AHRP35869 848 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 TSSK4Q6SA08 328 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 HTR3DQ70Z44 454 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 RCBTB1Q8NDN9 531 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 STK35Q8TDR2 534 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 OR7D2Q96RA2 312 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 COQ3Q9NZJ6 369 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 HHLA2Q9UM44 414 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 ZNF443Q9Y2A4 671 aaPredicted RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 KDM3BQ7LBC6 1761 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 CDHR4A6H8M9 788 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 EFCAB7A8K855 629 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 C1orf105O95561 183 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 EDN1P05305 212 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 THEGLP0DJG4 465 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 PRKACBP22694 351 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 GABRA5P31644 462 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 RAP2BP61225 183 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 IL13RA1P78552 427 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 TSPAN31Q12999 210 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 KCNJ8Q15842 424 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 LIPIQ6XZB0 460 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 LILRA2Q8N149 483 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 OR8J2Q8NGG1 315 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 OR5D14Q8NGL3 314 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 LILRB4Q8NHJ6 448 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 FAM71F1Q96KD3 344 aaPredicted RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 APOOQ9BUR5 198 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 ZNF160Q9HCG1 818 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 PLEKHJ1Q9NW61 149 aa12.31□□□□□ -0.44
TNC-212ENST00000542877 MYEF2Q9P2K5 600 aaKnown RBP12.31□□□□□ -0.44
TNC-212ENST00000542877 C17orf105B2RV13 164 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 FOXE1O00358 373 aaPredicted RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 GPRIN2O60269 458 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 CTHP32929 405 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 ETV6P41212 452 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 PRLHRP49683 370 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 P2RY14Q15391 338 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 SLC5A12Q1EHB4 618 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 DEFB110Q30KQ9 67 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 KCTD11Q693B1 232 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 SLC35F3Q8IY50 421 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 ANKRD28O15084 1053 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 SEC14L5O43304 696 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 MMP12P39900 470 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 FXYD4P59646 89 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 HBA1P69905 142 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 MELKQ14680 651 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 RTL6Q6ICC9 239 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 RPL22L1Q6P5R6 122 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 USP53Q70EK8 1073 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 RNF128Q8TEB7 428 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 ZNF583Q96ND8 569 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 PLEKHA3Q9HB20 300 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 FAM230AA0A1W2PPH8 454 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 UBBP0CG47 229 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 UBCP0CG48 685 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 CYBAP13498 195 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 HIST1H1TP22492 207 aaPredicted RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 DAPP51397 102 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 CTSCP53634 463 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 UBE2NLQ5JXB2 153 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 HORMAD2Q8N7B1 307 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 POC1BQ8TC44 478 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 MALSU1Q96EH3 234 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 GIMAP5Q96F15 307 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 RPS10P5Q9NQ39 176 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 ADAM29Q9UKF5 820 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 CCDC88AQ3V6T2 1871 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 CNMDO75829 334 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 BMP4P12644 408 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 CASP3P42574 277 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 UBA52P62987 128 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 CAMK2DQ13557 499 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 ZNF169Q14929 603 aaPredicted RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 HNRNPA1L2Q32P51 320 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 GPR139Q6DWJ6 353 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 OR56B4Q8NH76 319 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 NANOS1Q8WY41 292 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 SSX3Q99909 188 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 ST6GALNAC5Q9BVH7 336 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 RBM24Q9BX46 236 aaKnown RBP12.3□□□□□ -0.44
TNC-212ENST00000542877 LINC00597Q9H2U6 94 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 KCMF1Q9P0J7 381 aa12.3□□□□□ -0.44
TNC-212ENST00000542877 PSORS1C1Q9UIG5 152 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms