RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
CHFR-221ENST00000542714 GAS1P54826 345 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 MLF1P58340 268 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 ST3GAL3Q11203 375 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 SRSF6Q13247 344 aaKnown RBP12.14□□□□□ -0.47
CHFR-221ENST00000542714 KCNAB2Q13303 367 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 NTRK2Q16620 822 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 ZNF791Q3KP31 576 aaPredicted RBP12.14□□□□□ -0.47
CHFR-221ENST00000542714 H3F3CQ6NXT2 135 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 PGBD2Q6P3X8 592 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 ZNF613Q6PF04 617 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 CBLN3Q6UW01 205 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 USP51Q70EK9 711 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 NUP54Q7Z3B4 507 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 MARVELD2Q8N4S9 558 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 DHRSXQ8N5I4 330 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 AQP11Q8NBQ7 271 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 OR4K5Q8NGD3 323 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 CYGBQ8WWM9 190 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 ZNF524Q96C55 264 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 SPACA9Q96E40 222 aaPredicted RBP12.14□□□□□ -0.47
CHFR-221ENST00000542714 ANKRD60Q9BZ19 345 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 LAT2Q9GZY6 243 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 CDCP1Q9H5V8 836 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 GPN2Q9H9Y4 310 aaPredicted RBP12.14□□□□□ -0.47
CHFR-221ENST00000542714 KIF17Q9P2E2 1029 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 CARD8Q9Y2G2 431 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 PCDHGB5Q9Y5G0 923 aa12.14□□□□□ -0.47
CHFR-221ENST00000542714 DMXL1Q9Y485 3027 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 B4DXG7 233 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 GTPBP1O00178 669 aaKnown RBP12.13□□□□□ -0.47
CHFR-221ENST00000542714 ZNF264O43296 627 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 PIP5K1CO60331 668 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 OR6B1O95007 311 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 ANGPTL1O95841 491 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 SERPINA7P05543 415 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 MST1P26927 711 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 RYKP34925 604 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 RAD23AP54725 363 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 RFX4Q33E94 735 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 BICRALQ6AI39 1079 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 VASH2Q86V25 355 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 APLFQ8IW19 511 aaPredicted RBP12.13□□□□□ -0.47
CHFR-221ENST00000542714 LSMEM1Q8N8F7 131 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 OR10G3Q8NGC4 313 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 TMEM255BQ8WV15 326 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 PSMF1Q92530 271 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 TTC9Q92623 222 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 GTPBP3Q969Y2 492 aaKnown RBP12.13□□□□□ -0.47
CHFR-221ENST00000542714 DGCR6LQ9BY27 220 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 GABARAPL3Q9BY60 117 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 TBL1XR1Q9BZK7 514 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 TRIM2Q9C040 744 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 TMEM27Q9HBJ8 222 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 KRT84Q9NSB2 600 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 FAM118AQ9NWS6 357 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 UBAP1Q9NZ09 502 aa12.13□□□□□ -0.47
CHFR-221ENST00000542714 YARS2Q9Y2Z4 477 aaKnown RBP12.13□□□□□ -0.47
CHFR-221ENST00000542714 H0YAE9 185 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 H3BNH8 94 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 NDUFB5O43674 189 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 OR10H3O60404 316 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 EIF4E2O60573 245 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 CLIC3O95833 236 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 ADAP00813 363 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 TP53P04637 393 aaPredicted RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 ICAM2P13598 275 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 EPHA2P29317 976 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 TMED10P49755 219 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 UGT2B15P54855 530 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 IL1RL1Q01638 556 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 ATP1A1-AS1Q5TC04 95 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 B3GNTL1Q67FW5 361 aaPredicted RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 KLHL17Q6TDP4 642 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 PRICKLE2Q7Z3G6 844 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 ZER1Q7Z7L7 766 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 RPS19BP1Q86WX3 136 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 MEX3DQ86XN8 651 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 BRIX1Q8TDN6 353 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 ACOT11Q8WXI4 607 aaPredicted RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 SLC38A4Q969I6 547 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 NTNG2Q96CW9 530 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 TMCO6Q96DC7 493 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 SH3YL1Q96HL8 342 aaPredicted RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 CNBD2Q96M20 576 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 GPA33Q99795 319 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 RIBC2Q9H4K1 309 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 Q9H521 79 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 GALNT9Q9HCQ5 603 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 PAPOLBQ9NRJ5 636 aaKnown RBP12.12□□□□□ -0.47
CHFR-221ENST00000542714 REV1Q9UBZ9 1251 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 KLK13Q9UKR3 277 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 ICAM5Q9UMF0 924 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 MGAT4BQ9UQ53 548 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 POFUT2Q9Y2G5 429 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 ORC6Q9Y5N6 252 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 MPDZO75970 2070 aa12.12□□□□□ -0.47
CHFR-221ENST00000542714 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
CHFR-221ENST00000542714 TRABD2BA6NFA1 517 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms