RNA–Protein interactions for RNA: ENST00000541667.5

CLSTN3-211, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-211ENST00000541667 TUBBP07437 444 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 FCGR2AP12318 317 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 HPGDP15428 266 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 PRKCAP17252 672 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 AGTR1P30556 359 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 EIF1P41567 113 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 KCNJ5P48544 419 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 P2RX1P51575 399 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 ZNF41P51814 821 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 CARD18P57730 90 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 RPS26P62854 115 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 ZNF844Q08AG5 666 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 IFFO1Q0D2I5 559 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 TP53BP2Q13625 1128 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 EXOC3L2Q2M3D2 409 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 SMU1Q2TAY7 513 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 SHEQ5VZ18 495 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 OR4F3Q6IEY1 312 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 HEPHL1Q6MZM0 1159 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 NUFIP2Q7Z417 695 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 C6orf120Q7Z4R8 191 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 NUDCD3Q8IVD9 361 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 GABRG1Q8N1C3 465 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 LRRC75A-AS1Q8N1F1 130 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 CIARTQ8N365 385 aaPredicted RBP10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 OR5AK3PQ8NH89 298 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 RNF128Q8TEB7 428 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 ZC3HAV1LQ96H79 300 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 TMEM204Q9BSN7 226 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 PRRG4Q9BZD6 226 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 COQ10BQ9H8M1 238 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 GLRX2Q9NS18 164 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 ATAD3AQ9NVI7 634 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 STOML1Q9UBI4 398 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 HAO1Q9UJM8 370 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 DTNAQ9Y4J8 743 aa10.53□□□□□ -0.72
CLSTN3-211ENST00000541667 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 PRAMEF27A3QJZ7 478 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 WDR91A4D1P6 747 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 BCAS1O75363 584 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 DDX5P17844 614 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 PSMB1P20618 241 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 MATN1P21941 496 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ENPP1P22413 925 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ELK4P28324 431 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 SFTPDP35247 375 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 SUMO3P55854 103 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ABCE1P61221 599 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 PLAURQ03405 335 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ZNF141Q15928 474 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 MAPK14Q16539 360 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ZNF239Q16600 458 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 TMEM176BQ3YBM2 270 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 TUSC5Q8IXB3 177 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 OR8J2Q8NGG1 315 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 OR5W2Q8NH69 310 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 LILRB1Q8NHL6 650 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 MIPOL1Q8TD10 442 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ABHD3Q8WU67 409 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 MOAP1Q96BY2 351 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ZG16BQ96DA0 208 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 C18orf12Q96KH6 178 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 ZIM3Q96PE6 472 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 PRPF18Q99633 342 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 PARD6BQ9BYG5 372 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 SSU72Q9NP77 194 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 MCTS1Q9ULC4 181 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 FAF1Q9UNN5 650 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 EMC9Q9Y3B6 208 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 GPC6Q9Y625 555 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 V9GYY5 206 aaPredicted RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 FN1P02751 2386 aaKnown RBP10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 USF3Q68DE3 2245 aa10.52□□□□□ -0.73
CLSTN3-211ENST00000541667 SERINC4A6NH21 518 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 ZNF814B7Z6K7 855 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 RNASET2O00584 256 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 BIRC5O15392 142 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 EIF4E2O60573 245 aaKnown RBP10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 UGT2B17O75795 530 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 SYNGR4O95473 234 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 SERPINE1P05121 402 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 GUSBP08236 651 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 KRT16P08779 473 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 PPP3CBP16298 524 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 ATP6V1C1P21283 382 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 EDNRAP25101 427 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 CASP9P55211 416 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 CTBP2P56545 445 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 FUT5Q11128 374 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 CHI3L2Q15782 390 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 PGS1Q32NB8 556 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 ARHGAP11BQ3KRB8 267 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 PDZK1Q5T2W1 519 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 PRSS57Q6UWY2 283 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 SEZ6L2Q6UXD5 910 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 TFAP2EQ6VUC0 442 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 BEND4Q6ZU67 534 aa10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 ZNF75CPQ92670 426 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-211ENST00000541667 PIGTQ969N2 578 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms