RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 RNASEH1O60930 286 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 NDUFS6O75380 124 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 NOL4O94818 638 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 LCA5LO95447 670 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 IL6P05231 212 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 SERPINE2P07093 398 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CCDC166P0CW27 439 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 DARSP14868 501 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 ETS2P15036 469 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CYP11B1P15538 503 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 NQO2P16083 231 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ACADSP16219 412 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 NCK1P16333 377 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 STOMP27105 288 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PSMB6P28072 239 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 OXTRP30559 389 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 NKX2-1P43699 371 aaPredicted RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 NPY2RP49146 381 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PCYT1AP49585 367 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 LIMK2P53671 638 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CCL23P55773 120 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CLDN20P56880 219 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PLP1P60201 277 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 FZD5Q13467 585 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 MEF2DQ14814 521 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ODF4Q2M2E3 257 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ZNF385BQ569K4 471 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 XKR4Q5GH76 650 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 AARS2Q5JTZ9 985 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 OTUD3Q5T2D3 398 aaPredicted RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 LYPLAL1Q5VWZ2 237 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 KIAA0895LQ68EN5 471 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 KCNIP4Q6PIL6 250 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 VITQ6UXI7 678 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 TMIGD1Q6UXZ0 262 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CEACAM20Q6UY09 585 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 MON1BQ7L1V2 547 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ZNF367Q7RTV3 350 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 LIMS2Q7Z4I7 341 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PTOV1Q86YD1 416 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CNGA4Q8IV77 575 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ZBTB8OSQ8IWT0 167 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 LRRC8AQ8IWT6 810 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 TEX26Q8N6G2 289 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 MAB21L3Q8N8X9 362 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 NOA1Q8NC60 698 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 WDR36Q8NI36 951 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 NANPQ8TBE9 248 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ARRDC2Q8TBH0 407 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 BADQ92934 168 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 RAD51AP1Q96B01 352 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 KRTAP4-5Q9BYR2 181 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 FAM234AQ9H0X4 552 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 SEMA6AQ9H2E6 1030 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 ATP13A3Q9H7F0 1226 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 POLD4Q9HCU8 107 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 MLXIPLQ9NP71 852 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PNRC2Q9NPJ4 139 aaKnown RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 SLC52A3Q9NQ40 469 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 OLFML3Q9NRN5 406 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.98□□□□□ -1.61
DDB1-219ENST00000541513 NKIRAS1Q9NYS0 192 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 RBAKQ9NYW8 714 aaPredicted RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 ADA2Q9NZK5 511 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PSMC3IPQ9P2W1 217 aaPredicted RBP4.98□□□□□ -1.61
DDB1-219ENST00000541513 CIDEBQ9UHD4 219 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 FBXL2Q9UKC9 423 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PITPNC1Q9UKF7 332 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PADI3Q9ULW8 664 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 TMED3Q9Y3Q3 217 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 PUS1Q9Y606 427 aaKnown RBP eCLIP4.98□□□□□ -1.61
DDB1-219ENST00000541513 DUSP10Q9Y6W6 482 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 CHD7Q9P2D1 2997 aa4.98□□□□□ -1.61
DDB1-219ENST00000541513 KIAA1671Q9BY89 1806 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 SERINC4A6NH21 518 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 SHISA7A6NL88 538 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 A6NNC1 897 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 ITGB1BP1O14713 200 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 FPGTO14772 594 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 MPPED1O15442 326 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 KLRC4O43908 158 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 GPR137BO60478 399 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 STK17BO94768 372 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 EML2O95834 649 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 DCNP07585 359 aaKnown RBP4.97□□□□□ -1.61
DDB1-219ENST00000541513 KRT7P08729 469 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 GSTA2P09210 222 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 ELFN1P0C7U0 828 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 UQCRBP14927 111 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 TNNI1P19237 187 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 MSH3P20585 1137 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 M6PRP20645 277 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 CD52P31358 61 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 HNRNPH1P31943 449 aaKnown RBP4.97□□□□□ -1.61
DDB1-219ENST00000541513 DUTP33316 252 aaKnown RBP4.97□□□□□ -1.61
DDB1-219ENST00000541513 SLC7A2P52569 658 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 PLA2G16P53816 162 aa4.97□□□□□ -1.61
DDB1-219ENST00000541513 PEX3P56589 373 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms