RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SLC39A1Q9NY26 324 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 GPR83Q9NYM4 423 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 DNAJC27Q9NZQ0 273 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 PSORS1C1Q9UIG5 152 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 CARD8Q9Y2G2 431 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 B3GALT1Q9Y5Z6 326 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 EXPH5Q8NEV8 1989 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 PCNX3Q9H6A9 2034 aa11.26□□□□□ -0.61
AP003559.1-201ENST00000540906 TMX2-CTNND1H3BSU7 103 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TO15178 435 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ENTPD6O75354 484 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 UMODP07911 640 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 HBQ1P09105 142 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF806P0C7X5 589 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 FPR3P25089 353 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 MST1P26927 711 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ABCD3P28288 659 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 C21orf33P30042 268 aaPredicted RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CCKBRP32239 447 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 GIPRP48546 466 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ST13P50502 369 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 PSMD4P55036 377 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 GP2P55259 537 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CDC42P60953 191 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 RNF4P78317 190 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 INSM1Q01101 510 aaPredicted RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 COX10Q12887 443 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ZBED5Q49AG3 693 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CLEC12AQ5QGZ9 265 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TMEM205Q6UW68 189 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 RASSF6Q6ZTQ3 369 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 PTCHD4Q6ZW05 846 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TCEANCQ8N8B7 351 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 GALNT6Q8NCL4 622 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 B3GNT7Q8NFL0 401 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ART5Q96L15 291 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 EDEM2Q9BV94 578 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 PARD6AQ9NPB6 346 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 FBXO8Q9NRD0 319 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TAS2R16Q9NYV7 291 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TVP23BQ9NYZ1 205 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 COPS7AQ9UBW8 275 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CFL2Q9Y281 166 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 LOXL2Q9Y4K0 774 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 MASP2O00187 686 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CHP2O43745 196 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 GMFGO60234 142 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 FADS2O95864 444 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CELA2AP08217 269 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 IFI30P13284 250 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 EFNB1P98172 346 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 PLCXD2Q0VAA5 305 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 SKP2Q13309 424 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF613Q6PF04 617 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 BORAQ6PGQ7 559 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF620Q6ZNG0 422 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC29A4Q7RTT9 530 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CPEB2Q7Z5Q1 589 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 GPR141Q7Z602 305 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 MARCH3Q86UD3 253 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC34A3Q8N130 599 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 DEPDC4Q8N2C3 294 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 LSMEM1Q8N8F7 131 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 OR13F1Q8NGS4 319 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 PHOSPHO1Q8TCT1 267 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 MR1Q95460 341 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 MUL1Q969V5 352 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 FKBP10Q96AY3 582 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 DGCR14Q96DF8 476 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ZNF426Q9BUY5 554 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 ULBP3Q9BZM4 244 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 POLR2J2Q9GZM3 115 aaKnown RBP11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 CXorf56Q9H5V9 222 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TMEM27Q9HBJ8 222 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 SLC25A19Q9HC21 320 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 UBQLN4Q9NRR5 601 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 PLCXD1Q9NUJ7 323 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TOR4AQ9NXH8 423 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 BLOC1S6Q9UL45 172 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 TPRKBQ9Y3C4 175 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 HRH3Q9Y5N1 445 aa11.25□□□□□ -0.61
AP003559.1-201ENST00000540906 SYNDIG1LA6NDD5 238 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 CCDC160A6NGH7 325 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 B4DXG7 233 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 LRRN3E7EW58 273 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 KLF7O75840 302 aaPredicted RBP11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 NADKO95544 446 aaPredicted RBP11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 STSP08842 583 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 GSTM3P21266 225 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 TBXA2RP21731 343 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 PCSK6P29122 969 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 IFNA8P32881 189 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 STAT5AP42229 794 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 DCAF7P61962 342 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 SNRPGP62308 76 aaKnown RBP11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 PRKCDQ05655 676 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 FHL1Q13642 323 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 ALG10BQ5I7T1 473 aa11.24□□□□□ -0.61
AP003559.1-201ENST00000540906 HLA-DQA1Q5Y7H0 255 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms