RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 NME4O00746 187 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 PRRG2O14669 202 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 BCKDKO14874 412 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 SLC19A2O60779 497 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 ACTL6AO96019 429 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 T-ENOLP0DO92 83 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 BMP7P18075 431 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 PGCP20142 388 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 CHMP24386 653 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 RYKP34925 604 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 SLC6A8P48029 635 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 CASP6P55212 293 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 PCBP3P57721 371 aaKnown RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 EEFSECP57772 596 aaKnown RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 EEF1A1P68104 462 aaKnown RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 SKP2Q13309 424 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 GXYLT1Q4G148 440 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 MRPL2Q5T653 305 aaKnown RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 RAET1LQ5VY80 246 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 ZNF836Q6ZNA1 936 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 ARMC8Q8IUR7 673 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 CHERPQ8IWX8 916 aaKnown RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 ZNF440Q8IYI8 595 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 MICU2Q8IYU8 434 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 PGAM4Q8N0Y7 254 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 CLIP4Q8N3C7 705 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 FAM71CQ8NEG0 241 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 BHLHE22Q8NFJ8 381 aaPredicted RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 OR5M1Q8NGP8 315 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 FBXO27Q8NI29 283 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 ZBTB8AQ96BR9 441 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 SFXN2Q96NB2 322 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 TIMP4Q99727 224 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 PIGQQ9BRB3 760 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 EXOSC3Q9NQT5 275 aaKnown RBP14.05□□□□□ -0.16
DDB1-218ENST00000540784 RLIMQ9NVW2 624 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 TMEM181Q9P2C4 612 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 SPRR3Q9UBC9 169 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 USP22Q9UPT9 525 aa14.05□□□□□ -0.16
DDB1-218ENST00000540784 LINC01387J3KSC0 135 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 GSTA4O15217 222 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 DNAJA2O60884 412 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
DDB1-218ENST00000540784 GCM2O75603 506 aaPredicted RBP14.04□□□□□ -0.16
DDB1-218ENST00000540784 MFN2O95140 757 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 IFNA14P01570 189 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 TPOP07202 933 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 LINGO3P0C6S8 592 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 PRKAR1BP31321 381 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 EIF1P41567 113 aaKnown RBP14.04□□□□□ -0.16
DDB1-218ENST00000540784 UQCRFS1P47985 274 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 GFRA1P56159 465 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 B3GALT5-AS1P59052 145 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 PLPPR5Q32ZL2 321 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 NHSL2Q5HYW2 709 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 WLSQ5T9L3 541 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 RNF220Q5VTB9 566 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 VASNQ6EMK4 673 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 ENPP6Q6UWR7 440 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 CCDC80Q76M96 950 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 ZNF550Q7Z398 422 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 GRAMD2AQ8IUY3 354 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 TNIP2Q8NFZ5 429 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 ZNF563Q8TA94 476 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 FAM57AQ8TBR7 257 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 SLC26A7Q8TE54 656 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 TMEM234Q8WY98 164 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 CDRT15Q96T59 188 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 KLHDC3Q9BQ90 382 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 UGT2B28Q9BY64 529 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 ALG2Q9H553 416 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 DNAJB12Q9NXW2 375 aaKnown RBP14.04□□□□□ -0.16
DDB1-218ENST00000540784 STOML1Q9UBI4 398 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 TNFRSF10DQ9UBN6 386 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 SLC13A4Q9UKG4 626 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 ZNF337Q9Y3M9 751 aa14.04□□□□□ -0.16
DDB1-218ENST00000540784 ZNF462Q96JM2 2506 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 TRGV8A0A0C4DH27 118 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 OR2M5A3KFT3 312 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 CFAP73A6NFT4 308 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 TPST1O60507 370 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 WISP1O95388 367 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 UQCRBP14927 111 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 STARP49675 285 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 GSK3BP49841 420 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 CBX1P83916 185 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 QPRTQ15274 297 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 TOMM34Q15785 309 aaPredicted RBP14.03□□□□□ -0.16
DDB1-218ENST00000540784 TMEM44Q2T9K0 475 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 DHRS4L2Q6PKH6 230 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 Q6ZPB1 254 aaPredicted RBP14.03□□□□□ -0.16
DDB1-218ENST00000540784 DOLPP1Q86YN1 238 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 DEFB107AQ8IZN7 70 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 GTPBP8Q8N3Z3 284 aaPredicted RBP14.03□□□□□ -0.16
DDB1-218ENST00000540784 OR5M9Q8NGP3 310 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 KCTD14Q9BQ13 255 aaPredicted RBP14.03□□□□□ -0.16
DDB1-218ENST00000540784 PINK1Q9BXM7 581 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 ACER3Q9NUN7 267 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 KLHL28Q9NXS3 571 aa14.03□□□□□ -0.16
DDB1-218ENST00000540784 ALKBH4Q9NXW9 302 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms