RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 FRKP42685 505 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 OR3A2P47893 321 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PRIM2P49643 509 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 SERPINB9P50453 376 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 FOXA1P55317 472 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PKNOX1P55347 436 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 CARD18P57730 90 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 C21orf58P58505 322 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 DSCR9P59020 149 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 MAGOHP61326 146 aaKnown RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 C2orf80Q0P641 193 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 FOXF1Q12946 379 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 LCP2Q13094 533 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ITGADQ13349 1161 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ZNHIT3Q15649 155 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 GTF2IRD2BQ6EKJ0 949 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PPP4R4Q6NUP7 873 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 Q6ZT83 130 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 IKBIPQ70UQ0 350 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 TRMT10CQ7L0Y3 403 aaKnown RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 BHLHA15Q7RTS1 189 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 ZNF551Q7Z340 670 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 CPLX4Q7Z7G2 160 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 GTF2IRD2Q86UP8 949 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 MISPQ8IVT2 679 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 LILRA2Q8N149 483 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 BANPQ8N9N5 519 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 GATSQ8NAP1 163 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 METTL6Q8TCB7 284 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ZNF75CPQ92670 426 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 KISS1RQ969F8 398 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 CPNE4Q96A23 557 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 L3HYPDHQ96EM0 354 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 FCRL1Q96LA6 429 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 HS6ST2Q96MM7 605 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 KCNA7Q96RP8 456 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PAFAH2Q99487 392 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PSD2Q9BQI7 771 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 C19orf24Q9BVV8 132 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 TXLNGYQ9BZA5 131 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ROPN1BQ9BZX4 212 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 GSTO2Q9H4Y5 243 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 CXorf36Q9H7Y0 433 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ROPN1Q9HAT0 212 aaPredicted RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 C3orf14Q9HBI5 128 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 CISD1Q9NZ45 108 aaKnown RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 LPAR3Q9UBY5 353 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 TIMM22Q9Y584 194 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ACTL7BQ9Y614 415 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PKD1L1Q8TDX9 2849 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 FAM234BA2RU67 622 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TRIM49D1C9J1S8 452 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 E7EQL1 145 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 NPIPB9F8W1W9 429 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 H7C417 338 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 UBFD1O14562 309 aaKnown RBP6.45□□□□□ -1.38
YBX3-209ENST00000540747 RGS14O43566 566 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 SSX4O60224 188 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 SUPT7LO94864 414 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 FESP07332 822 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 YES1P07947 543 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 INHBAP08476 426 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 IGHV4-31P0DP07 118 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 PRPS2P11908 318 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 SLC25A16P16260 332 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 IMPDH1P20839 514 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ENPP1P22413 925 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ME2P23368 584 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ATP5F1P24539 256 aaPredicted RBP6.45□□□□□ -1.38
YBX3-209ENST00000540747 IGFBP5P24593 272 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 GCAP28676 217 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 HMOX2P30519 316 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TTKP33981 857 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 PHBP35232 272 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 EIF1P41567 113 aaKnown RBP6.45□□□□□ -1.38
YBX3-209ENST00000540747 RFX3P48380 749 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ZNF41P51814 821 aaPredicted RBP6.45□□□□□ -1.38
YBX3-209ENST00000540747 PRKAA2P54646 552 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 CASP9P55211 416 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 CDH11P55287 796 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ZNF117Q03924 483 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 PDE7AQ13946 482 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 KIAA0040Q15053 153 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 DUSP5Q16690 384 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ZNF385BQ569K4 471 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 SLC25A53Q5H9E4 307 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TMEM201Q5SNT2 666 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TIMM23BQ5SRD1 257 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 PDSS1Q5T2R2 415 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 ALKBH2Q6NS38 261 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 B3GLCTQ6Y288 498 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TIFABQ6ZNK6 161 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 Q6ZSR9 355 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 CCDC121Q6ZUS5 278 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 FCRLAQ7L513 359 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 SSX8Q7RTT4 187 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 TRIM46Q7Z4K8 759 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 CDRT4Q8N9R6 151 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 SLC16A11Q8NCK7 471 aa6.45□□□□□ -1.38
YBX3-209ENST00000540747 OR6Y1Q8NGX8 325 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms