RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZNF225Q9UK10 706 aa2.09□□□□□ -2.07
MDM2-227ENST00000540709 PLLPQ9Y342 182 aa2.09□□□□□ -2.07
MDM2-227ENST00000540709 AP4B1Q9Y6B7 739 aa2.09□□□□□ -2.07
MDM2-227ENST00000540709 UBE4BO95155 1302 aa2.09□□□□□ -2.08
MDM2-227ENST00000540709 PTCH1Q13635 1447 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 LTBP1Q14766 1721 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 CUX2O14529 1486 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 IGHV1OR15-1A0A075B7D0 117 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 TRIM64A6NGJ6 449 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 TRIM64BA6NI03 449 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 OR6C65A6NJZ3 312 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 A8MUA0 341 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ADAM12O43184 909 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 EFNA2O43921 213 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ALPPP05187 535 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ZCCHC18P0CG32 403 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ALPPL2P10696 532 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 PDHBP11177 359 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ANXA3P12429 323 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ZNF823P16415 610 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 EPHX2P34913 555 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 PMELP40967 661 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 RGS1Q08116 209 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 C1orf186Q6ZWK4 172 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ARCQ7LC44 396 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 FAM220AQ7Z4H9 259 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 C17orf82Q86X59 251 aaPredicted RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 FAM71E2Q8N5Q1 922 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 ZNF713Q8N859 430 aaPredicted RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 MDS2Q8NDY4 140 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 OR56B1Q8NGI3 324 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 BLOC1S5Q8TDH9 187 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 FAM151AQ8WW52 585 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 SLC5A11Q8WWX8 675 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 C14orf79Q96F83 325 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 VSTM2LQ96N03 204 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 SPXQ9BT56 116 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 TBCDQ9BTW9 1192 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 CRNKL1Q9BZJ0 848 aaKnown RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 POLR2J2Q9GZM3 115 aaKnown RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 RAB17Q9H0T7 212 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 POLR2J3Q9H1A7 115 aaKnown RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 GPN2Q9H9Y4 310 aaPredicted RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 PAK1IP1Q9NWT1 392 aaPredicted RBP2.08□□□□□ -2.08
MDM2-227ENST00000540709 BTNL2Q9UIR0 455 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 NUDCQ9Y266 331 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 MYO10Q9HD67 2058 aa2.08□□□□□ -2.08
MDM2-227ENST00000540709 IGLV4-60A0A075B6I1 120 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 RNF103-CHMP3A0A140T963 221 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 FAM230AA0A1W2PPH8 454 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 RNF222A6NCQ9 220 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 ANKRD30BLA7E2S9 258 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 K7N7A8 449 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 NPIPB7O75200 414 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 MED6O75586 246 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 TOM1L1O75674 476 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 SNAPINO95295 136 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 IGHV3-48P01763 117 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 AQP1P29972 269 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 NMT1P30419 496 aaKnown RBP2.07□□□□□ -2.08
MDM2-227ENST00000540709 ASMTP46597 345 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 CCR6P51684 374 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 PLK1P53350 603 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 ARFRP1Q13795 201 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 GGTLC2Q14390 218 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 PDK1Q15118 436 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 NSDHLQ15738 373 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 FAM120AOSQ5T036 256 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 TSPO2Q5TGU0 170 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 SYT10Q6XYQ8 523 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 RNF165Q6ZSG1 346 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 LINC01551Q86U37 167 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 ZNF429Q86V71 674 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 NRMQ8IXM6 262 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 OR52I1Q8NGK6 324 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 OR1E3Q8WZA6 343 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 CCDC47Q96A33 483 aaKnown RBP2.07□□□□□ -2.08
MDM2-227ENST00000540709 OR5B2Q96R09 309 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 TMEM121Q9BTD3 319 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 CHRDL1Q9BU40 450 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 SLC17A9Q9BYT1 436 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 ROPN1Q9HAT0 212 aaPredicted RBP2.07□□□□□ -2.08
MDM2-227ENST00000540709 NECAP2Q9NVZ3 263 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 MRPL39Q9NYK5 338 aaKnown RBP2.07□□□□□ -2.08
MDM2-227ENST00000540709 STOX2Q9P2F5 926 aaPredicted RBP2.07□□□□□ -2.08
MDM2-227ENST00000540709 RIMS3Q9UJD0 308 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 ABCC4O15439 1325 aa2.07□□□□□ -2.08
MDM2-227ENST00000540709 IGLV4-69A0A075B6H9 119 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 HELTA6NFD8 242 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 FAM74A7A6NL05 159 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 LRRC30A6NM36 301 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 GJE1A6NN92 205 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 RASGRF2O14827 1237 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 AKR7A3O95154 331 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 PCCAP05165 728 aaPredicted RBP2.06□□□□□ -2.08
MDM2-227ENST00000540709 ETS1P14921 441 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 STMN1P16949 149 aa2.06□□□□□ -2.08
MDM2-227ENST00000540709 RCC1P18754 421 aaPredicted RBP2.06□□□□□ -2.08
MDM2-227ENST00000540709 XRCC1P18887 633 aaPredicted RBP2.06□□□□□ -2.08
MDM2-227ENST00000540709 KIF5BP33176 963 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms