RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 INAQ16352 499 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 MAPK14Q16539 360 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 NTRK2Q16620 822 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.7□□□□□ -0.86
ATL3-204ENST00000540699 ZNF311Q5JNZ3 666 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 HLA-DQA1Q5Y7H0 255 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 SHQ1Q6PI26 577 aaKnown RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 FIGNL1Q6PIW4 674 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 CLEC18BQ6UXF7 455 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 RTL4Q6ZR62 310 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 HMGN2P46Q86SG4 172 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 CARM1Q86X55 608 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 CYP4Z2PQ8N1L4 340 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 TMEM156Q8N614 296 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 CLEC18CQ8NCF0 446 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 OR4C15Q8NGM1 316 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 PHF10Q8WUB8 498 aaKnown RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 PROX1Q92786 737 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 NTNG2Q96CW9 530 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 SPACA9Q96E40 222 aaPredicted RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 NRBF2Q96F24 287 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 RMND5BQ96G75 393 aaPredicted RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 EPYCQ99645 322 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 VCXQ9H320 206 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 Q9N2J8 555 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ANKRD10Q9NXR5 420 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 USE1Q9NZ43 259 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ACAD8Q9UKU7 415 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 CBLCQ9ULV8 474 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ZNF443Q9Y2A4 671 aaPredicted RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 IFT52Q9Y366 437 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 SH3GLB1Q9Y371 365 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 MAGED1Q9Y5V3 778 aaPredicted RBP9.7□□□□□ -0.86
ATL3-204ENST00000540699 LYVE1Q9Y5Y7 322 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 FREM3P0C091 2139 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ZGRF1Q86YA3 2104 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 POLEQ07864 2286 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 ICE1Q9Y2F5 2266 aa9.7□□□□□ -0.86
ATL3-204ENST00000540699 J3KTA2 159 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 M0R3H8 397 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 GNGT2O14610 69 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 FFAR1O14842 300 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ADAMDEC1O15204 470 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 NME2P1O60361 137 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 SLC25A12O75746 678 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 UGT2B17O75795 530 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 HPRP00739 348 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ALPLP05186 524 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 DBIP07108 87 aaKnown RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 CD46P15529 392 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ITGA2P17301 1181 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 NME2P22392 152 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 RRM2P31350 389 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ST13P50502 369 aaKnown RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 ALDH3A2P51648 485 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 HMGA2P52926 109 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 NRG3P56975 720 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 OC90Q02509 493 aaPredicted RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 PPP1R8Q12972 351 aaKnown RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 GK3PQ14409 553 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 TAF11Q15544 211 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 GPR68Q15743 365 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 LIN52Q52LA3 116 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ZNF766Q5HY98 468 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 RNF220Q5VTB9 566 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 SPINK14Q6IE38 97 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 SLC25A25Q6KCM7 469 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 TMEM81Q6P7N7 255 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 IL20RBQ6UXL0 311 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ZNF836Q6ZNA1 936 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 MDGA2Q7Z553 956 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 TSPYL5Q86VY4 417 aaPredicted RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 HIPK1Q86Z02 1210 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 RBM45Q8IUH3 476 aaKnown RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 ZDHHC13Q8IUH4 622 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 PEX5LQ8IYB4 626 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 HS3ST5Q8IZT8 346 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 SLC34A3Q8N130 599 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 GALNT4Q8N4A0 578 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 BCORP1Q8N888 145 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 TMEM178AQ8NBL3 297 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 OR6T1Q8NGN1 323 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 OR52P1PQ8NH57 321 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 PAQR8Q8TEZ7 354 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 RNF138Q8WVD3 245 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 ZNF570Q96NI8 536 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 SECISBP2Q96T21 854 aaKnown RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 BARD1Q99728 777 aaKnown RBP9.69□□□□□ -0.86
ATL3-204ENST00000540699 PIP5K1AQ99755 562 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 OSBPL10Q9BXB5 764 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATL3-204ENST00000540699 HPF1Q9NWY4 346 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 A4GNTQ9UNA3 340 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 NPFFR2Q9Y5X5 522 aa9.69□□□□□ -0.86
ATL3-204ENST00000540699 DNAJC13O75165 2243 aa9.68□□□□□ -0.86
ATL3-204ENST00000540699 ZNF407Q9C0G0 2248 aa9.68□□□□□ -0.86
ATL3-204ENST00000540699 NCKAP5O14513 1909 aa9.68□□□□□ -0.86
ATL3-204ENST00000540699 NPIPA5A0A0B4J1W7 369 aa9.68□□□□□ -0.86
ATL3-204ENST00000540699 OR6C70A6NIJ9 312 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms