RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FAM86C2PA6NEL3 165 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 OR52A4PA6NMU1 304 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 PRR23D1E9PI22 279 aaPredicted RBP11.41□□□□□ -0.58
NPC1-202ENST00000540608 RCBTB2O95199 551 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 PRR23D2P0DMB1 279 aaPredicted RBP11.41□□□□□ -0.58
NPC1-202ENST00000540608 CMPK1P30085 196 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 SRP9P49458 86 aaKnown RBP11.41□□□□□ -0.58
NPC1-202ENST00000540608 CLDN2P57739 230 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 FOXK2Q01167 660 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 IRF4Q15306 451 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 CD276Q5ZPR3 534 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 ZNF425Q6IV72 752 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 RPL13AP3Q6NVV1 102 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 WDR88Q6ZMY6 472 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 MTSS1LQ765P7 747 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 ASPGQ86U10 573 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 PFN4Q8NHR9 129 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 SUN5Q8TC36 379 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 TMEM239Q8WW34 195 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 COL26A1Q96A83 441 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 SDF2Q99470 211 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 C20orf141Q9NUB4 165 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 SLCO1C1Q9NYB5 712 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 ELF5Q9UKW6 265 aaPredicted RBP11.41□□□□□ -0.58
NPC1-202ENST00000540608 ZMIZ1Q9ULJ6 1067 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 MGAT4AQ9UM21 535 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 PLEKHM1Q9Y4G2 1056 aa11.41□□□□□ -0.58
NPC1-202ENST00000540608 KIAA0100Q14667 2235 aaKnown RBP11.41□□□□□ -0.58
NPC1-202ENST00000540608 ICMTO60725 284 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 TSC22D2O75157 780 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 TCRBP04435 133 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 IFI30P13284 250 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 HTR2AP28223 471 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 UQCRC1P31930 480 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 OR1Q1Q15612 314 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 DUSP5Q16690 384 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 SLC25A35Q3KQZ1 300 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 CCDC28AQ8IWP9 274 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 OR2L13Q8N349 312 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 ZNF655Q8N720 491 aaPredicted RBP11.4□□□□□ -0.58
NPC1-202ENST00000540608 ASB16Q96NS5 453 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 OR2M2Q96R28 347 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 TRPM6Q9BX84 2022 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 OR51J1Q9H342 316 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 ATP13A2Q9NQ11 1180 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 PHPT1Q9NRX4 125 aaPredicted RBP11.4□□□□□ -0.58
NPC1-202ENST00000540608 CLDND1Q9NY35 253 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 PTTG3PQ9NZH4 202 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 ZNF222Q9UK12 451 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 NPFFR2Q9Y5X5 522 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 CENPVL1A0A0U1RR11 272 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 LINC01553A4QN01 128 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 LYPD3O95274 346 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 SBK2P0C263 348 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 PRG2P13727 222 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 LBX1P52954 281 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 GPR68Q15743 365 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 RPE65Q16518 533 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 ACSM3Q53FZ2 586 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 TJAP1Q5JTD0 557 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 AGBL4Q5VU57 503 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 TEX261Q6UWH6 196 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 LYPD4Q6UWN0 246 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 KCT2Q8NC54 265 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 C4orf36Q96KX1 117 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 PGLYRP3Q96LB9 341 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 U3KQ87 197 aa11.4□□□□□ -0.58
NPC1-202ENST00000540608 TEX13CA0A0J9YWL9 993 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 PRR19A6NJB7 356 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 J3QLW9 94 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SLC22A5O76082 557 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 PAK4O96013 591 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 ANXA3P12429 323 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 PEPDP12955 493 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 MYOGP15173 224 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ZNF19P17023 458 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 WASP42768 502 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 CAPZA2P47755 286 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 NRG3P56975 720 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 RPS7P62081 194 aaKnown RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 ZNF85Q03923 595 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 IKZF1Q13422 519 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 MAPK14Q16539 360 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 GARNL3Q5VVW2 1013 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TMPRSS11FQ6ZWK6 438 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SAMD14Q8IZD0 417 aaPredicted RBP11.39□□□□□ -0.59
NPC1-202ENST00000540608 CDK20Q8IZL9 346 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 TOMM5Q8N4H5 51 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 SLC44A3Q8N4M1 653 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 C17orf47Q8NEP4 570 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 BADQ92934 168 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 YIPF5Q969M3 257 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 GAL3ST3Q96A11 431 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 IFT27Q9BW83 186 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 OR51V1Q9H2C8 321 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ERVMER34-1Q9H9K5 563 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 ADGRL4Q9HBW9 690 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 COPZ2Q9P299 210 aa11.39□□□□□ -0.59
NPC1-202ENST00000540608 MDC1Q14676 2089 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms