RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CCR6P51684 374 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 BNC1Q01954 994 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 ASAH1Q13510 395 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 OR1Q1Q15612 314 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 NDUFA9Q16795 377 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 RASSF6Q6ZTQ3 369 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 ASPGQ86U10 573 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 GPR135Q8IZ08 494 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 OR4K14Q8NGD5 310 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 OR52L1Q8NGH7 329 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 OR5H6Q8NGV6 325 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 OSTF1Q92882 214 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 SNAPC3Q92966 411 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 CD180Q99467 661 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 TCEAL2Q9H3H9 227 aaPredicted RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 EXOSC1Q9Y3B2 195 aaKnown RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 WDFY4Q6ZS81 3184 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 TMEM129A0AVI4 362 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 CELA2BP08218 269 aaPredicted RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 ACSL1P33121 698 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 EOGTQ5NDL2 527 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 DGAT2L6Q6ZPD8 337 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 ACBD7Q8N6N7 88 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 ZNF433Q8N7K0 673 aaPredicted RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 OR6K6Q8NGW6 343 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 CNOT9Q92600 299 aaKnown RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 RFKQ969G6 155 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 TNFRSF13CQ96RJ3 184 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 SDF2Q99470 211 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 PDCD1LG2Q9BQ51 273 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 TEX12Q9BXU0 123 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 SLC25A18Q9H1K4 315 aa13.11□□□□□ -0.31
INO80E-203ENST00000540562 AK6Q9Y3D8 172 aaKnown RBP13.11□□□□□ -0.31
INO80E-203ENST00000540562 INMT-MINDY4F8WBC2 141 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 RNF13O43567 381 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 HNRNPA1P09651 372 aaKnown RBP eCLIP13.1□□□□□ -0.31
INO80E-203ENST00000540562 DDOSTP39656 456 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 CCR4P51679 360 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 CCDC58Q4VC31 144 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 FBXO42Q6P3S6 717 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 HCAR2Q8TDS4 363 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 FOXN4Q96NZ1 517 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 HDAC8Q9BY41 377 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 BCL2L10Q9HD36 194 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 URB1O60287 2271 aaKnown RBP13.1□□□□□ -0.31
INO80E-203ENST00000540562 PRSS38A1L453 326 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 UNC119BA6NIH7 251 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 CASC3O15234 703 aaKnown RBP13.1□□□□□ -0.31
INO80E-203ENST00000540562 CHST10O43529 356 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 SSTR2P30874 369 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 EVX1P49640 407 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 PGDP52209 483 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 VSX2P58304 361 aaPredicted RBP13.1□□□□□ -0.31
INO80E-203ENST00000540562 EFNB1P98172 346 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 GALK2Q01415 458 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 FAM98AQ8NCA5 519 aaKnown RBP13.1□□□□□ -0.31
INO80E-203ENST00000540562 OR5W2Q8NH69 310 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 TMEM239Q8WW34 195 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 FGF11Q92914 225 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 PTP4A1Q93096 173 aa13.1□□□□□ -0.31
INO80E-203ENST00000540562 CDHR4A6H8M9 788 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 APODP05090 189 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 YES1P07947 543 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 ARSBP15848 533 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 COL9A1P20849 921 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 PPP3R1P63098 170 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 MAT1AQ00266 395 aaKnown RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 RGS1Q08116 209 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 CRYZQ08257 329 aaKnown RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 FZD5Q13467 585 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 GNA13Q14344 377 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 ZIC1Q15915 447 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 FAAP20Q6NZ36 180 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 SETD6Q8TBK2 473 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 BPIFA2Q96DR5 249 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 ABHD1Q96SE0 405 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 CLDND1Q9NY35 253 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 CDH10Q9Y6N8 788 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 KDM4EB2RXH2 506 aaPredicted RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 EFCAB14O75071 495 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 RPP14O95059 124 aaKnown RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
INO80E-203ENST00000540562 IL9P15248 144 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 TMEM35AQ53FP2 167 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 DCST2Q5T1A1 773 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 MBOAT2Q6ZWT7 520 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 RNF44Q7L0R7 432 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 OR52E2Q8NGJ4 325 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 WDFY2Q96P53 400 aa13.09□□□□□ -0.31
INO80E-203ENST00000540562 PPP1R3EQ9H7J1 279 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms