RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 FPR3P25089 353 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 LSSP48449 732 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 VSX2P58304 361 aaPredicted RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 TNFRSF17Q02223 184 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 SLC25A35Q3KQZ1 300 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 TP53I3Q53FA7 332 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 DCST2Q5T1A1 773 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 PARGQ86W56 976 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 SLC37A3Q8NCC5 494 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 SDR9C7Q8NEX9 313 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 OR52L1Q8NGH7 329 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 TMEM239Q8WW34 195 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CNOT9Q92600 299 aaKnown RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 WDFY2Q96P53 400 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 TIMM29Q9BSF4 260 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 TEX12Q9BXU0 123 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 MRPL15Q9P015 296 aaKnown RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 RASD1Q9Y272 281 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CDH10Q9Y6N8 788 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 COLEC10Q9Y6Z7 277 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 MN1Q10571 1320 aaPredicted RBP12.67□□□□□ -0.38
BNIP3-202ENST00000540159 UNC119BA6NIH7 251 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 EEF1E1O43324 174 aaKnown RBP12.67□□□□□ -0.38
BNIP3-202ENST00000540159 VASPP50552 380 aaPredicted RBP12.67□□□□□ -0.38
BNIP3-202ENST00000540159 ASAH1Q13510 395 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 LYPD8Q6UX82 237 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 PAQR7Q86WK9 346 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 TIGD4Q8IY51 512 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 ACBD7Q8N6N7 88 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 POGLUT1Q8NBL1 392 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 OR4K13Q8NH42 304 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 SFXN5Q8TD22 340 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 PTP4A1Q93096 173 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 PHF21AQ96BD5 680 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 PEX11GQ96HA9 241 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 PRSS27Q9BQR3 290 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 ORAI3Q9BRQ5 295 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF649Q9BS31 505 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 CLDND1Q9NY35 253 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 DAPP1Q9UN19 280 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 B3GALT2O43825 422 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 EIF4EP06730 217 aaKnown RBP12.67□□□□□ -0.38
BNIP3-202ENST00000540159 IL9P15248 144 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 UGT2B7P16662 529 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 LRRC17Q8N6Y2 441 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 ARIH2OSQ8N7S6 290 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 BMPERQ8N8U9 685 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF485Q8NCK3 441 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 SRFBP1Q8NEF9 429 aaKnown RBP12.67□□□□□ -0.38
BNIP3-202ENST00000540159 SETD6Q8TBK2 473 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 TNFRSF13CQ96RJ3 184 aa12.67□□□□□ -0.38
BNIP3-202ENST00000540159 MTHFD2LQ9H903 347 aaPredicted RBP12.67□□□□□ -0.38
BNIP3-202ENST00000540159 H0YGG7 62 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 STK25O00506 426 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 RNF13O43567 381 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 RDH16O75452 317 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 SOX30O94993 753 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 ADH1BP00325 375 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 EVI2BP34910 448 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 ARF3P61204 181 aaPredicted RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 PRPF38BQ5VTL8 546 aaKnown RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 FIGLAQ6QHK4 219 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 CEACAM19Q7Z692 300 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 NOXA1Q86UR1 476 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 GDPD1Q8N9F7 314 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 BEST4Q8NFU0 473 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 OR4M1Q8NGD0 313 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 OR5J2Q8NH18 312 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 PCNPQ8WW12 178 aaKnown RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 BPIFA2Q96DR5 249 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 SIPA1Q96FS4 1042 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 OR2B2Q9GZK3 357 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 MOV10Q9HCE1 1003 aaKnown RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 EVA1BQ9NVM1 165 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 KCMF1Q9P0J7 381 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 A0A087WV48 116 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 TRDV1A0A1B0GX56 115 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 ANKRD61A6NGH8 418 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 EPOPA6NHQ4 379 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 HMX3A6NHT5 357 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 FCER2P06734 321 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 CD3GP09693 182 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 TFPIP10646 304 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 ALAS2P22557 587 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 HTR1FP30939 366 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 PRKAR1BP31321 381 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 EVX1P49640 407 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 AGFG1P52594 562 aaKnown RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 SRP54P61011 504 aaKnown RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 DECR1Q16698 335 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 OR4D9Q8NGE8 314 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 GAL3ST3Q96A11 431 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 OR2A5Q96R48 311 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 RAB11FIP5Q9BXF6 653 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 MCOLN1Q9GZU1 580 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 PPP1R3EQ9H7J1 279 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 MEPEQ9NQ76 525 aaPredicted RBP12.66□□□□□ -0.38
BNIP3-202ENST00000540159 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
BNIP3-202ENST00000540159 FANCMQ8IYD8 2048 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms