RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 A0A087WZY1 265 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 C15orf38-AP3S2A0A0A6YYH1 394 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 C7orf72A4D263 438 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 C5orf58C9J3I9 102 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 RNF223E7ERA6 249 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 AIM2O14862 343 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ZIC3O60481 467 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EIF4E2O60573 245 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 DNAJA2O60884 412 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PGM3O95394 542 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 CSTAP01040 98 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 DBIP07108 87 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 THBS1P07996 1170 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 LINGO3P0C6S8 592 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PABPC4LP0CB38 370 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 UBTFL6P0CB48 400 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 NID1P14543 1247 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ETS2P15036 469 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF17P17021 662 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 HK1P19367 917 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 TCEA1P23193 301 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PCGF2P35227 344 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PTGS2P35354 604 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 CA7P43166 264 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 CPA2P48052 419 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF41P51814 821 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PCBP3P57721 371 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EEF1A1P68104 462 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 KCNJ10P78508 379 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 CDK6Q00534 326 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 RBBP4Q09028 425 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 TMEM44Q2T9K0 475 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EIF2S3LQ2VIR3 472 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PLPPR5Q32ZL2 321 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 LIN52Q52LA3 116 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EMC4Q5J8M3 183 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 MRPL2Q5T653 305 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 RNF220Q5VTB9 566 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 VASNQ6EMK4 673 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 REEP3Q6NUK4 255 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ARSKQ6UWY0 536 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF836Q6ZNA1 936 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EIF3MQ7L2H7 374 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ARPINQ7Z6K5 226 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 CD163Q86VB7 1156 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 VRK2Q86Y07 508 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 CMIPQ8IY22 773 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PEX5LQ8IYB4 626 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 TMCO5AQ8N6Q1 288 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 C11orf65Q8NCR3 313 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 HIPK4Q8NE63 616 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 TOR1AIP2Q8NFQ8 470 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 OR52P1PQ8NH57 321 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 OR10A6Q8NH74 314 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 B4GALNT2Q8NHY0 566 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 FAM57AQ8TBR7 257 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 SARAFQ96BY9 339 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ARSGQ96EG1 525 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 NPAS1Q99742 590 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 SH3GL1Q99961 368 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 SPATA9Q9BWV2 254 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 RSPO3Q9BXY4 272 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 UGT2B28Q9BY64 529 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PRDM14Q9GZV8 571 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 LAT2Q9GZY6 243 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EXO5Q9H790 373 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EFCAB1Q9HAE3 211 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 EXOSC3Q9NQT5 275 aaKnown RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 MED17Q9NVC6 651 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ARL8BQ9NVJ2 186 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ABCD2Q9UBJ2 740 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 TAGLN3Q9UI15 199 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 TINAGQ9UJW2 476 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 OSGIN2Q9Y236 505 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ANGPT4Q9Y264 503 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 VDAC3Q9Y277 283 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 ZNF443Q9Y2A4 671 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 RPH3AQ9Y2J0 694 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 SLC6A5Q9Y345 797 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 GPC6Q9Y625 555 aaPredicted RBP6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 PCNX1Q96RV3 2341 aa6.32□□□□□ -1.4
LPCAT3-209ENST00000540060 DOCK7Q96N67 2140 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 PTPN13Q12923 2485 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 OR2M5A3KFT3 312 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 CLEC18AA5D8T8 446 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 CDHR4A6H8M9 788 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 CCT8L1PA6NM43 557 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 FAM220BPB1ANY3 271 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 SHISA8B8ZZ34 492 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 NPIPA2E9PIF3 369 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 NPIPA3F8WFD2 350 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 GTPBP1O00178 669 aaKnown RBP6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 ETV2O00321 342 aaPredicted RBP6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 NME4O00746 187 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 PRRG2O14669 202 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 BCKDKO14874 412 aa6.31□□□□□ -1.4
LPCAT3-209ENST00000540060 ADAM11O75078 769 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms