RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DCAF12Q5T6F0 453 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 CDCP2Q5VXM1 449 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 SLX4IPQ5VYV7 408 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 PGBD2Q6P3X8 592 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 CD300LDQ6UXZ3 194 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 ZNF517Q6ZMY9 492 aaPredicted RBP15.56■□□□□ 0.08
COPS3-212ENST00000539941 ZNF527Q8NB42 609 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 B3GNT7Q8NFL0 401 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 OR4K5Q8NGD3 323 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 FBLIM1Q8WUP2 373 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 RNF31Q96EP0 1072 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 ZNF559Q9BR84 538 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 ULBP3Q9BZM4 244 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 CDV3Q9UKY7 258 aaKnown RBP15.56■□□□□ 0.08
COPS3-212ENST00000539941 LOXL2Q9Y4K0 774 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 NOX1Q9Y5S8 564 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 DCDC2BA2VCK2 349 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 TRAPPC13A5PLN9 417 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 SLC30A4O14863 429 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 ADH7P40394 386 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 RPP38P78345 283 aaKnown RBP15.55■□□□□ 0.08
COPS3-212ENST00000539941 INSM1Q01101 510 aaPredicted RBP15.55■□□□□ 0.08
COPS3-212ENST00000539941 COX10Q12887 443 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 RAPSNQ13702 412 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 FAAH2Q6GMR7 532 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 LCN10Q6JVE6 187 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 ZNF550Q7Z398 422 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 SLC15A4Q8N697 577 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 ZNF441Q8N8Z8 693 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 NFAM1Q8NET5 270 aaPredicted RBP15.55■□□□□ 0.08
COPS3-212ENST00000539941 HDAC2Q92769 488 aaKnown RBP15.55■□□□□ 0.08
COPS3-212ENST00000539941 GTPBP3Q969Y2 492 aaKnown RBP15.55■□□□□ 0.08
COPS3-212ENST00000539941 SLC41A3Q96GZ6 507 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 GAL3ST4Q96RP7 486 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 UCK2Q9BZX2 261 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 UBQLN4Q9NRR5 601 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 DNAJB12Q9NXW2 375 aaKnown RBP15.55■□□□□ 0.08
COPS3-212ENST00000539941 SLC35A3Q9Y2D2 325 aa15.55■□□□□ 0.08
COPS3-212ENST00000539941 A0A1W2PPW3 197 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 MED19A0JLT2 244 aaPredicted RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 SERINC4A6NH21 518 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 C4orf47A7E2U8 309 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 CD63P08962 238 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 TOP3AQ13472 1001 aaPredicted RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 ISXQ2M1V0 245 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 RBM48Q5RL73 367 aaKnown RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 C1orf94Q6P1W5 598 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 ZNF613Q6PF04 617 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 KLHL17Q6TDP4 642 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 FAM198BQ6UWH4 519 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 GDF7Q7Z4P5 450 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 CPEB2Q7Z5Q1 589 aaKnown RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 IGFN1Q86VF2 1251 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 ZNF440Q8IYI8 595 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 ZNF614Q8N883 585 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 ACOT11Q8WXI4 607 aaPredicted RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 CNOT9Q92600 299 aaKnown RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 MR1Q95460 341 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 TP53INP1Q96A56 240 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 LPAR4Q99677 370 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 BCL7BQ9BQE9 202 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 DDA1Q9BW61 102 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 CTPS2Q9NRF8 586 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 A0A087WUU8 490 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 OSMP13725 252 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 GSTM3P21266 225 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 KRT20P35900 424 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 GGT2P36268 569 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 HOXC5Q00444 222 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 PLAURQ03405 335 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 CD47Q08722 323 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 EIF3IQ13347 325 aaKnown RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 RAB39AQ14964 217 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 KLHL26Q53HC5 615 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 GPR107Q5VW38 600 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 PAPD4Q6PIY7 484 aaKnown RBP15.54■□□□□ 0.08
COPS3-212ENST00000539941 ISLR2Q6UXK2 745 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 RAB11FIP2Q7L804 512 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 SLCO6A1Q86UG4 719 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 SLC34A3Q8N130 599 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 OR8K3Q8NH51 312 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 LILRB4Q8NHJ6 448 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 VMP1Q96GC9 406 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 PRR14Q9BWN1 585 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 TRIM2Q9C040 744 aa15.54■□□□□ 0.08
COPS3-212ENST00000539941 ANKRD34BA5PLL1 514 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 TM4SF5O14894 197 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 IDH3BO43837 385 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 GKN3PP0CG01 181 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 PRG2P13727 222 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 POU2F1P14859 743 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 HTR2AP28223 471 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 EPHA2P29317 976 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 RNF4P78317 190 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 IL5RAQ01344 420 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 ALDH6A1Q02252 535 aaKnown RBP15.53■□□□□ 0.08
COPS3-212ENST00000539941 TARDBPQ13148 414 aaKnown RBP eCLIP15.53■□□□□ 0.08
COPS3-212ENST00000539941 OR1Q1Q15612 314 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 CCDC157Q569K6 752 aa15.53■□□□□ 0.08
COPS3-212ENST00000539941 C6orf141Q5SZD1 244 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms