RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 LINGO3P0C6S8 592 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 CASP3P42574 277 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 GAS1P54826 345 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 SMIM11AP58511 58 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 LSM11P83369 360 aaKnown RBP eCLIP17.49■□□□□ 0.39
TRPT1-207ENST00000539436 ST3GAL3Q11203 375 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 DAG1Q14118 895 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 DCST1Q5T197 706 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 PRAMEF20Q5VT98 475 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 OR10G2Q8NGC3 310 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 OR9Q2Q8NGE9 314 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 RNF138Q8WVD3 245 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 NRBF2Q96F24 287 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 OSBPL10Q9BXB5 764 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 VCXQ9H320 206 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 CNOT11Q9UKZ1 510 aaKnown RBP17.49■□□□□ 0.39
TRPT1-207ENST00000539436 TMCC3Q9ULS5 477 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 NINQ8N4C6 2090 aa17.49■□□□□ 0.39
TRPT1-207ENST00000539436 A0A1W2PRQ8 180 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 TRAPPC13A5PLN9 417 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 FMO6PO60774 539 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 CCNB2O95067 398 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 ITPKBP27987 946 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 IFNA8P32881 189 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 ID4P47928 161 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 IDH2P48735 452 aaKnown RBP17.48■□□□□ 0.39
TRPT1-207ENST00000539436 DAPP51397 102 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 DGCR6Q14129 220 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 TRAM2Q15035 370 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 INPP5JQ15735 1006 aaPredicted RBP17.48■□□□□ 0.39
TRPT1-207ENST00000539436 ZNF440Q8IYI8 595 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 GALNT16Q8N428 558 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 ZNF248Q8NDW4 579 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 SLC35B4Q969S0 331 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 FUZQ9BT04 418 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 ING2Q9H160 280 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 EXOSC3Q9NQT5 275 aaKnown RBP17.48■□□□□ 0.39
TRPT1-207ENST00000539436 PRDM4Q9UKN5 801 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 HRH3Q9Y5N1 445 aa17.48■□□□□ 0.39
TRPT1-207ENST00000539436 A0A1B0GWA3 101 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ZNF891A8MT65 544 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 B4DXG7 233 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 EIF4E2O60573 245 aaKnown RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 CCL3P10147 92 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ALDH3A2P51648 485 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 PPP2R2BQ00005 443 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 CDC20Q12834 499 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ABHD17BQ5VST6 288 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 LINC00696Q6ZRV3 163 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 MDGA2Q7Z553 956 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 NR4A3Q92570 626 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 FEVQ99581 238 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ZNF184Q99676 751 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 TRIM2Q9C040 744 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ICAM5Q9UMF0 924 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 G3V3Y1 287 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 DLGAP1O14490 977 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 MITFO75030 526 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 LYPD3O95274 346 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 NUDT14O95848 222 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ALPLP05186 524 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 RRADP55042 308 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 IL1RL1Q01638 556 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 OC90Q02509 493 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 C17orf67Q0P5P2 114 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 KCNAB2Q13303 367 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 TOMM34Q15785 309 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ZIK1Q3SY52 487 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 WDR88Q6ZMY6 472 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 PACRGLQ8N7B6 248 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 LSMEM1Q8N8F7 131 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 ATG16L2Q8NAA4 619 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 B4GALNT2Q8NHY0 566 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 TMEM255BQ8WV15 326 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 DNAJC9Q8WXX5 260 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 CCNL2Q96S94 520 aaPredicted RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 RBM4BQ9BQ04 359 aaKnown RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 PRSS27Q9BQR3 290 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 RBM4Q9BWF3 364 aaKnown RBP17.47■□□□□ 0.39
TRPT1-207ENST00000539436 OSBPL11Q9BXB4 747 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 GABARAPL1Q9H0R8 117 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 MED11Q9P086 117 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 RPS6KB2Q9UBS0 482 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 TEKT2Q9UIF3 430 aa17.47■□□□□ 0.39
TRPT1-207ENST00000539436 A0A087WUU8 490 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 A0A0B4J2E0 115 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 A0A1B0GX12 115 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 SH3PXD2BA1X283 911 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 GASTP01350 101 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 POU2F1P14859 743 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 ENDOUP21128 410 aaKnown RBP17.46■□□□□ 0.39
TRPT1-207ENST00000539436 P2RX1P51575 399 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 COPZ1P61923 177 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 COL28A1Q2UY09 1125 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 DEFB109BQ30KR1 87 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 SLC22A10Q63ZE4 541 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 ZNF613Q6PF04 617 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 GALNT5Q7Z7M9 940 aa17.46■□□□□ 0.39
TRPT1-207ENST00000539436 MEX3DQ86XN8 651 aaKnown RBP17.46■□□□□ 0.39
TRPT1-207ENST00000539436 APLFQ8IW19 511 aaPredicted RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms