RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 FAM214BQ7L5A3 538 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 ZNF614Q8N883 585 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 OR5W2Q8NH69 310 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 PIWIL2Q8TC59 973 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 NINJ1Q92982 152 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 GMPPAQ96IJ6 420 aaPredicted RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 TEX37Q96LM6 180 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 KLHL15Q96M94 604 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 SLC35A5Q9BS91 424 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 POLDIP3Q9BY77 421 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 CLEC4MQ9H2X3 399 aaPredicted RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 OR51I1Q9H343 314 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 WDR55Q9H6Y2 383 aaPredicted RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 GLRX2Q9NS18 164 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 EDARQ9UNE0 448 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 CARD8Q9Y2G2 431 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 EMC9Q9Y3B6 208 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 CELSR1Q9NYQ6 3014 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 GOLGA8QA0A0J9YX86 632 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 GOLGA8OA6NCC3 632 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 GOLGA8NF8WBI6 632 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 OIP5O43482 229 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 DNAJA2O60884 412 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SS18L1O75177 396 aaPredicted RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 SMNDC1O75940 238 aaKnown RBP eCLIP10.37□□□□□ -0.75
RTN3-209ENST00000538995 AQP8O94778 261 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SYNGR4O95473 234 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 NTN1O95631 604 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 CPSF4O95639 269 aaKnown RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 CGAP01215 116 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 IL6P05231 212 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 PABPC4LP0CB38 370 aaKnown RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 OR12D1P0DN82 309 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 KITP10721 976 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 PRKCAP17252 672 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 IL12AP29459 219 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 CPOXP36551 454 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 HPCAP84074 193 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SELENBP1Q13228 472 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SKP2Q13309 424 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 CBFBQ13951 182 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 TESK1Q15569 626 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 HBMQ6B0K9 141 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 TNFAIP8L2Q6P589 184 aaPredicted RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 VWA1Q6PCB0 445 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SPNS3Q6ZMD2 512 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 MSANTD1Q6ZTZ1 278 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 EIF3MQ7L2H7 374 aaKnown RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 LILRA2Q8N149 483 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 CLEC4FQ8N1N0 589 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 TMCO5AQ8N6Q1 288 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 FAM71CQ8NEG0 241 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 OR6K3Q8NGY3 331 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 GPR119Q8TDV5 335 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 CPNE4Q96A23 557 aaPredicted RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 ARL8AQ96BM9 186 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 C7orf26Q96N11 449 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 OR52E6Q96RD3 313 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 PANX1Q96RD7 426 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 NPAS1Q99742 590 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 KLHDC3Q9BQ90 382 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 PRRG4Q9BZD6 226 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 LAT2Q9GZY6 243 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SAP130Q9H0E3 1048 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 TIGARQ9NQ88 270 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SDR39U1Q9NRG7 319 aaPredicted RBP10.37□□□□□ -0.75
RTN3-209ENST00000538995 ELOVL5Q9NYP7 299 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 ZIM2Q9NZV7 527 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 NDRG3Q9UGV2 375 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 PROCRQ9UNN8 238 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 LIPT1Q9Y234 373 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 SLC35A3Q9Y2D2 325 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 WDR45Q9Y484 360 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 TESMINQ9Y4I5 508 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 F8P00451 2351 aa10.37□□□□□ -0.75
RTN3-209ENST00000538995 A0A0J9YW62 118 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 SH3D21A4FU49 640 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 CCDC154A6NI56 674 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ZNF195O14628 629 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 TNFSF11O14788 317 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 CXCL13O43927 109 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 FCMRO60667 390 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 SLC22A3O75751 556 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 UGT2B17O75795 530 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 PLGP00747 810 aaPredicted RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 CSTAP01040 98 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 IL11P20809 199 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 DNAJA1P31689 397 aaKnown RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 CD79BP40259 229 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 SLC6A8P48029 635 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 NME5P56597 212 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 SIRPAP78324 504 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 FUT5Q11128 374 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 GPR68Q15743 365 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 ZNF239Q16600 458 aaKnown RBP10.36□□□□□ -0.75
RTN3-209ENST00000538995 SLC9B1Q4ZJI4 515 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 NXNQ6DKJ4 435 aa10.36□□□□□ -0.75
RTN3-209ENST00000538995 GTF2IRD2BQ6EKJ0 949 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms