RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MECRQ9BV79 373 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 CXorf36Q9H7Y0 433 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 COQ10BQ9H8M1 238 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ZNF701Q9NV72 531 aaPredicted RBP11.15□□□□□ -0.62
VAMP1-206ENST00000538970 GPATCH2Q9NW75 528 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 KLHL13Q9P2N7 655 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 SNX8Q9Y5X2 465 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ACTL7BQ9Y614 415 aa11.15□□□□□ -0.62
VAMP1-206ENST00000538970 ZANQ9Y493 2812 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 GJE1A6NN92 205 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 NPIPB9F8W1W9 429 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 ZNF195O14628 629 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 HS3ST1O14792 307 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 TMCC2O75069 709 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 PEX11AO75192 247 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 CNOT4O95628 575 aaKnown RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 ARRB2P32121 409 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 CCT3P49368 545 aaKnown RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 P2RX1P51575 399 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 TP53BP2Q13625 1128 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 RNPS1Q15287 305 aaKnown RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 TUSC5Q8IXB3 177 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 ZNF527Q8NB42 609 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 STEAP2Q8NFT2 490 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 OR2W6PQ8NHA6 318 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 AGR3Q8TD06 166 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 ADAMTS15Q8TE58 950 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 S100PBPQ96BU1 408 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 REXO5Q96IC2 774 aaKnown RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 C3orf30Q96M34 536 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 C1orf50Q9BV19 199 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 ACTRT3Q9BYD9 372 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 HOXD1Q9GZZ0 328 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 CXorf56Q9H5V9 222 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 EML4Q9HC35 981 aaKnown RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 GP6Q9HCN6 339 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 TIGARQ9NQ88 270 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 ATAD3AQ9NVI7 634 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 SLC17A7Q9P2U7 560 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 FAF1Q9UNN5 650 aaPredicted RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 CARD8Q9Y2G2 431 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 GPC6Q9Y625 555 aaPredicted RBP11.14□□□□□ -0.63
VAMP1-206ENST00000538970 KCNE3Q9Y6H6 103 aa11.14□□□□□ -0.63
VAMP1-206ENST00000538970 H3BNH8 94 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 LYPLA1O75608 230 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 NTN1O95631 604 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 NUDT14O95848 222 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 C6orf47O95873 294 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 KRT16P08779 473 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 PRKCAP17252 672 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 ATP12AP54707 1039 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 TOMM34Q15785 309 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 NDUFAF6Q330K2 333 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 SPDYE7PQ495Y7 208 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 ATP6AP1LQ52LC2 224 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 TMEM201Q5SNT2 666 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 C6orf136Q5SQH8 315 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 ZCCHC23Q6ZST2 131 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 FCRLAQ7L513 359 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 NUFIP2Q7Z417 695 aaKnown RBP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 RIBC1Q8N443 379 aaPredicted RBP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 NATD1Q8N6N6 113 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 SFXN5Q8TD22 340 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 GPR119Q8TDV5 335 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 ZFP90Q8TF47 636 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 AKAP1Q92667 903 aaKnown RBP eCLIP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 ZNF524Q96C55 264 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 COQ8BQ96D53 544 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 TACO1Q9BSH4 297 aaKnown RBP11.13□□□□□ -0.63
VAMP1-206ENST00000538970 ANKZF1Q9H8Y5 726 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 DTNAQ9Y4J8 743 aa11.13□□□□□ -0.63
VAMP1-206ENST00000538970 TLDC2A0PJX2 215 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 INAFM1C9JVW0 142 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 ETV2O00321 342 aaPredicted RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SKAP2O75563 359 aaPredicted RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SOX30O94993 753 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SLU7O95391 586 aaKnown RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 NUDT17P0C025 328 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SERPINB5P36952 375 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 RPS4XP62701 263 aaKnown RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SELENBP1Q13228 472 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 CAPRIN1Q14444 709 aaKnown RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 TSC22D1Q15714 1073 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 TAB1Q15750 504 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 LSM12Q3MHD2 195 aaKnown RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 TMEM176BQ3YBM2 270 aaPredicted RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SLC25A53Q5H9E4 307 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SFRP5Q5T4F7 317 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 IL23RQ5VWK5 629 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 ADAM5Q6NVV9 412 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 SEZ6L2Q6UXD5 910 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 RIMKLAQ8IXN7 391 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 KRTCAP2Q8N6L1 136 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 ZNF614Q8N883 585 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 OR5D16Q8NGK9 328 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 OR5AK3PQ8NH89 298 aa11.12□□□□□ -0.63
VAMP1-206ENST00000538970 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
VAMP1-206ENST00000538970 RAB3IL1Q8TBN0 382 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms