RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNF550Q7Z398 422 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 ZNF440Q8IYI8 595 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 RNF217Q8TC41 542 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PRRC1Q96M27 445 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 ZNF347Q96SE7 839 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PIP5K1AQ99755 562 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PRR14Q9BWN1 585 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 RTN4RQ9BZR6 473 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 REEP1Q9H902 201 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 GALNT9Q9HCQ5 603 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 PPP4R1LQ9P1A2 415 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 RHCGQ9UBD6 479 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 STOML1Q9UBI4 398 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 U3KQV3 271 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 COL12A1Q99715 3063 aa12.94□□□□□ -0.34
CD4-208ENST00000538827 C2orf72A6NCS6 295 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 G3V3Y1 287 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 ADAMDEC1O15204 470 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 NUDT14O95848 222 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 CCL3P10147 92 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 RHCEP18577 417 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 PEX2P28328 305 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 IFNA8P32881 189 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 ZNF136P52737 540 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 UCNP55089 124 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 ZNF117Q03924 483 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 SKP2Q13309 424 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 FGD3Q5JSP0 725 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 ENTPD8Q5MY95 495 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 PIWIL3Q7Z3Z3 882 aaKnown RBP12.93□□□□□ -0.34
CD4-208ENST00000538827 TSEN54Q7Z6J9 526 aaKnown RBP12.93□□□□□ -0.34
CD4-208ENST00000538827 GPALPP1Q8IXQ4 340 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 ARMC10Q8N2F6 343 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 CADM2Q8N3J6 435 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 CENPNQ96H22 339 aaPredicted RBP12.93□□□□□ -0.34
CD4-208ENST00000538827 AGAP4Q96P64 663 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 BDH2Q9BUT1 245 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 FNDC11Q9BVV2 318 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 EVA1AQ9H8M9 152 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 VNN3Q9NY84 501 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 STMN3Q9NZ72 180 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 RPS6KB2Q9UBS0 482 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 SAMHD1Q9Y3Z3 626 aaKnown RBP12.93□□□□□ -0.34
CD4-208ENST00000538827 WIF1Q9Y5W5 379 aa12.93□□□□□ -0.34
CD4-208ENST00000538827 TNFRSF11BO00300 401 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 GADD45GO95257 159 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 P04436 131 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 UQCRBP14927 111 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 ENDOUP21128 410 aaKnown RBP12.92□□□□□ -0.34
CD4-208ENST00000538827 HTR2AP28223 471 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 CYB561P49447 251 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 HLCSP50747 726 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 IST1P53990 364 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 EPS8Q12929 822 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 PIN1Q13526 163 aaPredicted RBP12.92□□□□□ -0.34
CD4-208ENST00000538827 LRRC36Q1X8D7 754 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 AP1ARQ63HQ0 302 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 ISLR2Q6UXK2 745 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 HEATR5AQ86XA9 2040 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 GRAMD2AQ8IUY3 354 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 MISPQ8IVT2 679 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 FAM71CQ8NEG0 241 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 OR52J3Q8NH60 311 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 B4GALNT2Q8NHY0 566 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 ZNF563Q8TA94 476 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 EME1Q96AY2 570 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 SDCCAG3Q96C92 435 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 ZNF559Q9BR84 538 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 UTP23Q9BRU9 249 aaKnown RBP12.92□□□□□ -0.34
CD4-208ENST00000538827 LAT2Q9GZY6 243 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 SDHAF3Q9NRP4 125 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 RYDENQ9NUL5 291 aaKnown RBP12.92□□□□□ -0.34
CD4-208ENST00000538827 PLA2G3Q9NZ20 509 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 LRFN1Q9P244 771 aa12.92□□□□□ -0.34
CD4-208ENST00000538827 CNOT11Q9UKZ1 510 aaKnown RBP12.92□□□□□ -0.34
CD4-208ENST00000538827 CHCHD2Q9Y6H1 151 aaPredicted RBP12.92□□□□□ -0.34
CD4-208ENST00000538827 GNB5O14775 395 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 EIF4E2O60573 245 aaKnown RBP12.91□□□□□ -0.34
CD4-208ENST00000538827 TPST2O60704 377 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 WDPCPO95876 746 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 H1F0P07305 194 aaKnown RBP12.91□□□□□ -0.34
CD4-208ENST00000538827 LINGO3P0C6S8 592 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 ADH7P40394 386 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 PTGDSP41222 190 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 CASP3P42574 277 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 SLC6A8P48029 635 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 MASP1P48740 699 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 COPZ1P61923 177 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 MFAP5Q13361 173 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 TUBA3CQ13748 450 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 LAPTM4AQ15012 233 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 OR1Q1Q15612 314 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 EXOC3L2Q2M3D2 409 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 IQCCQ4KMZ1 466 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 OR5M10Q6IEU7 315 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 TUBA3EQ6PEY2 450 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 CBLN3Q6UW01 205 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 OFCC1Q8IZS5 231 aa12.91□□□□□ -0.34
CD4-208ENST00000538827 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms