RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 COG8Q96MW5 612 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 C1QTNF2Q9BXJ5 285 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 OBP2BQ9NPH6 170 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 DBHP09172 617 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 HOXD9P28356 352 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-205ENST00000538291 ETV4P43268 484 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 OR1D4P47884 311 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 CAV2P51636 162 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 CHDHQ8NE62 594 aaPredicted RBP15.78■□□□□ 0.12
SCARB1-205ENST00000538291 BORCS7Q96B45 105 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 AMDHD1Q96NU7 426 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 SULT4A1Q9BR01 284 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF696Q9H7X3 374 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 CA5BQ9Y2D0 317 aa15.78■□□□□ 0.12
SCARB1-205ENST00000538291 KAT6AQ92794 2004 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 OPN1LWP04000 364 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 NOVP48745 357 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 GPR139Q6DWJ6 353 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 OR4K15Q8NH41 348 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 ADAMTS16Q8TE57 1224 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 VSX1Q9NZR4 365 aaPredicted RBP15.77■□□□□ 0.12
SCARB1-205ENST00000538291 SHOXO15266 292 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 SLC16A7O60669 478 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 IFNA4P05014 189 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 IL7P13232 177 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 CSNK1EP49674 416 aaKnown RBP15.77■□□□□ 0.12
SCARB1-205ENST00000538291 ZNF142P52746 1687 aaPredicted RBP15.77■□□□□ 0.12
SCARB1-205ENST00000538291 TAS2R31P59538 309 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 UTP23Q9BRU9 249 aaKnown RBP15.77■□□□□ 0.12
SCARB1-205ENST00000538291 ST6GALNAC5Q9BVH7 336 aa15.77■□□□□ 0.12
SCARB1-205ENST00000538291 HIDE1A8MVS5 230 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 D6RAR5 112 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 EGFP01133 1207 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 PSMB5P28074 263 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 HOXA9P31269 272 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 PLCXD3Q63HM9 321 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 ASB11Q8WXH4 323 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 SNAPC3Q92966 411 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 OR7D2Q96RA2 312 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 INSM2Q96T92 566 aaPredicted RBP15.77■□□□□ 0.11
SCARB1-205ENST00000538291 UNKLQ9H9P5 680 aaKnown RBP15.77■□□□□ 0.11
SCARB1-205ENST00000538291 TREX1Q9NSU2 369 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 H0YGG7 62 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 YKT6O15498 198 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 DENRO43583 198 aaKnown RBP15.77■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF44P15621 663 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 THSD1Q9NS62 852 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 HHLA2Q9UM44 414 aa15.77■□□□□ 0.11
SCARB1-205ENST00000538291 A0A087WUU8 490 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 MANEAQ5SRI9 462 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 CCBE1Q6UXH8 406 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 GDPGP1Q6ZNW5 385 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 MFSD9Q8NBP5 474 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF576Q9H609 170 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 SLC22A7Q9Y694 548 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 CDC14CA4D256 554 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 GFRA2O00451 464 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 ADAM12O43184 909 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 RAB3DO95716 219 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 WDPCPO95876 746 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 ATP1B3P54709 279 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 SLC6A19Q695T7 634 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 FAM217AQ8IXS0 508 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 WDSUB1Q8N9V3 476 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 VN1R2Q8NFZ6 395 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 OR51Q1Q8NH59 317 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 OR5K2Q8NHB8 316 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 ZNF443Q9Y2A4 671 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 C17orf113A0A1B0GUU1 675 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 AFF3P51826 1226 aaKnown RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 ZP2Q05996 745 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 PIP5KL1Q5T9C9 394 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 TANGO2Q6ICL3 276 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 C19orf47Q8N9M1 422 aaKnown RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 ATOH1Q92858 354 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 MSANTD3Q96H12 275 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 TBCCD1Q9NVR7 557 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 AK6Q9Y3D8 172 aaKnown RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 URB1O60287 2271 aaKnown RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 TVP23AA6NH52 213 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 SLC43A1O75387 559 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 C1SP09871 688 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 POU3F1Q03052 451 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 KIAA1211LQ6NV74 962 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 TECPR1Q7Z6L1 1165 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 FAM83FQ8NEG4 500 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 IL17RDQ8NFM7 739 aa15.76■□□□□ 0.11
SCARB1-205ENST00000538291 DCAF13Q9NV06 445 aaKnown RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 CUEDC1Q9NWM3 386 aaPredicted RBP15.76■□□□□ 0.11
SCARB1-205ENST00000538291 RAB38P57729 211 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 KEAP1Q14145 624 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 OR5M10Q6IEU7 315 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 GDPD1Q8N9F7 314 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 FOXRED1Q96CU9 486 aaPredicted RBP15.75■□□□□ 0.11
SCARB1-205ENST00000538291 MICU1Q9BPX6 476 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 ARNT2Q9HBZ2 717 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 LHX3Q9UBR4 397 aa15.75■□□□□ 0.11
SCARB1-205ENST00000538291 LSM5Q9Y4Y9 91 aaKnown RBP15.75■□□□□ 0.11
SCARB1-205ENST00000538291 CD300LBA8K4G0 201 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms