RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 A6NIZ1 184 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 TRIM64CA6NLI5 447 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 NME4O00746 187 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 GABBR2O75899 941 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 CAPN3P20807 821 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 RAP1BP61224 184 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 NCS1P62166 190 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 RAP1AP62834 184 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 SF3B4Q15427 424 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00346-201ENST00000538077 ZNF750Q32MQ0 723 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 MINDY1Q8N5J2 469 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 MAELQ96JY0 434 aaKnown RBP10.5□□□□□ -0.73
LINC00346-201ENST00000538077 SULT4A1Q9BR01 284 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 DPCDQ9BVM2 203 aaPredicted RBP10.5□□□□□ -0.73
LINC00346-201ENST00000538077 CD93Q9NPY3 652 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 IL17CQ9P0M4 197 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 SRPK3Q9UPE1 567 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 ANKRD34BA5PLL1 514 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 RNASET2O00584 256 aaKnown RBP10.5□□□□□ -0.73
LINC00346-201ENST00000538077 SDC1P18827 310 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 IRS1P35568 1242 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 SSR4P51571 173 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 AFF3P51826 1226 aaKnown RBP10.5□□□□□ -0.73
LINC00346-201ENST00000538077 LKAAEAR1Q8TD35 194 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 TCTN2Q96GX1 697 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 C4orf36Q96KX1 117 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 TMEM246Q9BRR3 403 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 SMOXQ9NWM0 555 aa10.5□□□□□ -0.73
LINC00346-201ENST00000538077 BOKQ9UMX3 212 aaPredicted RBP10.5□□□□□ -0.73
LINC00346-201ENST00000538077 ANTXRLA6NF34 631 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 C12orf71A8MTZ7 269 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 FAM189A1O60320 539 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 ZNF44P15621 663 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 CAMLGP49069 296 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 SELENOWP63302 87 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 DMWDQ09019 674 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 CAMK2DQ13557 499 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 HCAR1Q9BXC0 346 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 FAM86C1Q9NVL1 165 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 EMC3Q9P0I2 261 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 FAM183AA6NL82 134 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 AIFM1O95831 613 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 F3P13726 295 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 CPMP14384 443 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MAOAP21397 527 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 SIX1Q15475 284 aaPredicted RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 OR8B8Q15620 311 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 KLHDC9Q8NEP7 349 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 H1FXQ92522 213 aaKnown RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MED20Q9H944 212 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 NOSIPQ9Y314 301 aaKnown RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 JRKO75564 520 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 LPLP06858 475 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 HTR5AP47898 357 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 DCDP81605 110 aaKnown RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MRPS21P82921 87 aaKnown RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 GPR19Q15760 415 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 RANBP10Q6VN20 620 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 RBM12BQ8IXT5 1001 aaKnown RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 SFXN5Q8TD22 340 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MAFIPQ8WZ33 124 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MUCL1Q96DR8 90 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 PGAP3Q96FM1 320 aaPredicted RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 ARL5BQ96KC2 179 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 ELF4Q99607 663 aaPredicted RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 TCHHQ07283 1943 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 TAF1P21675 1872 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 TCN2P20062 427 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 PRLHRP49683 370 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 SLC22A6Q4U2R8 563 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 FBXW12Q6X9E4 464 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 OR5K2Q8NHB8 316 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 ZNF480Q8WV37 535 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 SLC22A12Q96S37 553 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 CDCP1Q9H5V8 836 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 DDX31Q9H8H2 851 aaKnown RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 HHLA1C9JL84 531 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 E7ESA3 106 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 ATP6V1G1O75348 118 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MAP2K3P46734 347 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 CAV2P51636 162 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 PPP5CP53041 499 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 TLDC1Q6P9B6 456 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 ACBD4Q8NC06 268 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 DUSP19Q8WTR2 217 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 CREB3L1Q96BA8 519 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 INTS14Q96SY0 518 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 HIF1ANQ9NWT6 349 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 TJP1Q07157 1748 aa10.49□□□□□ -0.73
LINC00346-201ENST00000538077 SIPA1L3O60292 1781 aaPredicted RBP10.49□□□□□ -0.73
LINC00346-201ENST00000538077 MYH11P35749 1972 aa10.48□□□□□ -0.73
LINC00346-201ENST00000538077 S100PP25815 95 aa10.48□□□□□ -0.73
LINC00346-201ENST00000538077 SYPL1Q16563 259 aa10.48□□□□□ -0.73
LINC00346-201ENST00000538077 GPR155Q7Z3F1 870 aa10.48□□□□□ -0.73
LINC00346-201ENST00000538077 DCP2Q8IU60 420 aaKnown RBP10.48□□□□□ -0.73
LINC00346-201ENST00000538077 FRMD1Q8N878 549 aa10.48□□□□□ -0.73
LINC00346-201ENST00000538077 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
LINC00346-201ENST00000538077 ISG20Q96AZ6 181 aaKnown RBP10.48□□□□□ -0.73
LINC00346-201ENST00000538077 BPIFA2Q96DR5 249 aa10.48□□□□□ -0.73
LINC00346-201ENST00000538077 SAT2Q96F10 170 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms