RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 MAXP61244 160 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 DOC2BQ14184 412 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TAS1R1Q7RTX1 841 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 CMTM8Q8IZV2 173 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 OR1J4Q8NGS1 313 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 WFIKKN2Q8TEU8 576 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 FAIM2Q9BWQ8 316 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ABCG8Q9H221 673 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 NMNAT1Q9HAN9 279 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 EVPLQ92817 2033 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TMEM72A0PK05 275 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 RGS9O75916 674 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 LRATO95237 230 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 IGF2P01344 180 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 NR2C1P13056 603 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF35P13682 527 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 GPX2P18283 190 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 CXCL12P48061 93 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 DGKGP49619 791 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 SCAPQ12770 1279 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 GANABQ14697 944 aaKnown RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 SLC36A2Q495M3 483 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 AADACL4Q5VUY2 407 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 GLDNQ6ZMI3 551 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 MOB3CQ70IA8 216 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 LAS2Q8IYD9 372 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 HSD17B8Q92506 261 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 CMTM3Q96MX0 182 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 MGME1Q9BQP7 344 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF559Q9BR84 538 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ZNF471Q9BX82 626 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TM6SF2Q9BZW4 377 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 METTL9Q9H1A3 318 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 TMEM185BQ9H7F4 350 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 NPDC1Q9NQX5 325 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 ACSS1Q9NUB1 689 aaPredicted RBP10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 FZD4Q9ULV1 537 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 PRKAB1Q9Y478 270 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 PLXNA1Q9UIW2 1896 aa10.17□□□□□ -0.78
CLSTN3-207ENST00000537408 A0A1B0GVC2 190 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 A6NIN4 97 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OR10H3O60404 316 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 HLA-DQB2P05538 268 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ATXN1LP0C7T5 689 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 RPA2P15927 270 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ABOP16442 354 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 CELP19835 753 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 DCDP81605 110 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SRSF11Q05519 484 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 RAB40BQ12829 278 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 RUNX3Q13761 415 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 CYB5R2Q6BCY4 276 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 CXorf57Q6NSI4 855 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 CXXC5Q7LFL8 322 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 KLBQ86Z14 1044 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SPSB2Q99619 263 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 COPS8Q99627 209 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SEMA3CQ99985 751 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SLC25A51Q9H1U9 297 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 RNF122Q9H9V4 155 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 NANSQ9NR45 359 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PIPOXQ9P0Z9 390 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TRIP12Q14669 1992 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 C2orf92A0A1B0GVN3 265 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 IRAK2O43187 625 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 LATS1O95835 1130 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 HOXC4P09017 264 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 GAAP10253 952 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ADH5P11766 374 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SRFP11831 508 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MUC1P15941 1255 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PCGF2P35227 344 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ATP6V1E1P36543 226 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MMP15P51511 669 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 C2orf27AQ580R0 203 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 IL20RBQ6UXL0 311 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SEC11CQ9BY50 192 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 NOX3Q9HBY0 568 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ASB6Q9NWX5 421 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MED16Q9Y2X0 877 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PCDHB11Q9Y5F2 797 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MGAMO43451 1857 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 A0A087X0M5 115 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 A0A1B0GX30 115 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 GSAPA4D1B5 854 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ARRDC5A6NEK1 342 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 SOX14O95416 240 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 IGSF6O95976 241 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 IFNA17P01571 189 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 EDN3P14138 238 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 COX7A2P14406 83 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 TACR2P21452 398 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 OR1E2P47887 323 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 ANXA11P50995 505 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 AKR1C2P52895 323 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 AKR1C1Q04828 323 aa10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 MLF2Q15773 248 aaPredicted RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PAPD4Q6PIY7 484 aaKnown RBP10.16□□□□□ -0.78
CLSTN3-207ENST00000537408 PRICKLE2Q7Z3G6 844 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms