RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ARNTL2Q8WYA1 636 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 DCUN1D4Q92564 292 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 ADIPOR1Q96A54 375 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 PINX1Q96BK5 328 aaKnown RBP3.24□□□□□ -1.89
PRKDC-205ENST00000535375 ZNF416Q9BWM5 594 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 RPAP3Q9H6T3 665 aaPredicted RBP3.24□□□□□ -1.89
PRKDC-205ENST00000535375 COG4Q9H9E3 785 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 CALHM2Q9HA72 323 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 FANCFQ9NPI8 374 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 TRPV5Q9NQA5 729 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 AGPAT5Q9NUQ2 364 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 TMOD2Q9NZR1 351 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 RAB26Q9ULW5 256 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 NAP1L2Q9ULW6 460 aaPredicted RBP3.24□□□□□ -1.89
PRKDC-205ENST00000535375 EIF3LQ9Y262 564 aaKnown RBP3.24□□□□□ -1.89
PRKDC-205ENST00000535375 KIF3AQ9Y496 699 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 CDC42BPBQ9Y5S2 1711 aa3.24□□□□□ -1.89
PRKDC-205ENST00000535375 A0A1B0GUA9 196 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 TUBAL3A6NHL2 446 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 K7ENP7 123 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 SDHDO14521 159 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 TIMP1P01033 207 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CA3P07451 260 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CALCBP10092 127 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CCNE1P24864 410 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 UGT1A5P35504 534 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 GCKP35557 465 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 PTGFRP43088 359 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 LRRC63Q05C16 580 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 ANKDD1AQ495B1 522 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CFAP221Q4G0U5 840 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 LINC01620Q4KN68 170 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 OR8G2PQ6IF36 304 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 TMEM184AQ6ZMB5 413 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 ERASQ7Z444 233 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 SERPINA9Q86WD7 417 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CENPLQ8N0S6 344 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CCDC71LQ8N9Z2 235 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 ZSCAN4Q8NAM6 433 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-205ENST00000535375 STKLD1Q8NE28 680 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 OR2AP1Q8NGE2 309 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 OR2T34Q8NGX1 318 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 GIPC3Q8TF64 312 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CRACR2AQ9BSW2 395 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 RIBC2Q9H4K1 309 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 KAT8Q9H7Z6 458 aaKnown RBP3.23□□□□□ -1.89
PRKDC-205ENST00000535375 WDR76Q9H967 626 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 CAB39LQ9H9S4 337 aa3.23□□□□□ -1.89
PRKDC-205ENST00000535375 ZNF331Q9NQX6 463 aaPredicted RBP3.23□□□□□ -1.89
PRKDC-205ENST00000535375 ZSCAN5BA6NJL1 495 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 USP27XA6NNY8 438 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 IDH1O75874 414 aaKnown RBP3.22□□□□□ -1.89
PRKDC-205ENST00000535375 IGHDP01880 384 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 ANXA4P09525 319 aaPredicted RBP3.22□□□□□ -1.89
PRKDC-205ENST00000535375 THRBP10828 461 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 KRT13P13646 458 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 TNNI3P19429 210 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 PAICSP22234 425 aaKnown RBP3.22□□□□□ -1.89
PRKDC-205ENST00000535375 ARFIP1P53367 373 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 OSTNP61366 133 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 EXOSC2Q13868 293 aaKnown RBP3.22□□□□□ -1.89
PRKDC-205ENST00000535375 ZNF311Q5JNZ3 666 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 PPP1R42Q7Z4L9 355 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 DENND6BQ8NEG7 585 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 OR5AU1Q8NGC0 362 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 OR9A4Q8NGU2 314 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 OR10T2Q8NGX3 314 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 STARD4Q96DR4 205 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 SLC35E1Q96K37 410 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 VSTM2LQ96N03 204 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 VPS35Q96QK1 796 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 TXN2Q99757 166 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 TPPP3Q9BW30 176 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 TBC1D10AQ9BXI6 508 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 RAB33BQ9H082 229 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 COMMD4Q9H0A8 199 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 NARFLQ9H6Q4 476 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 LPAR2Q9HBW0 351 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 APMAPQ9HDC9 416 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 C1orf123Q9NWV4 160 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 ATP6V1HQ9UI12 483 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 LCMT1Q9UIC8 334 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 IFT52Q9Y366 437 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 WDR45Q9Y484 360 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 CHD4Q14839 1912 aa3.22□□□□□ -1.89
PRKDC-205ENST00000535375 SF3B1O75533 1304 aaKnown RBP eCLIP3.21□□□□□ -1.89
PRKDC-205ENST00000535375 IGLV3-16A0A075B6K0 115 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 LRRC30A6NM36 301 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 WASH3PC4AMC7 463 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 MAPK13O15264 365 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 DFNA5O60443 496 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 SPAG6O75602 509 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 SUPT7LO94864 414 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 MFN2O95140 757 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 PCCBP05166 539 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 BCKDHAP12694 445 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 IGLL1P15814 213 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 DRD5P21918 477 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 CD1BP29016 333 aa3.21□□□□□ -1.9
PRKDC-205ENST00000535375 OTX2P32243 289 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms