RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 NFKBIDQ8NI38 313 aa13.14□□□□□ -0.31
CSRP1-217ENST00000533188 ITLN2Q8WWU7 325 aaPredicted RBP13.14□□□□□ -0.31
CSRP1-217ENST00000533188 DTNBP1Q96EV8 351 aa13.14□□□□□ -0.31
CSRP1-217ENST00000533188 DMRTA2Q96SC8 542 aa13.14□□□□□ -0.31
CSRP1-217ENST00000533188 PRDM14Q9GZV8 571 aa13.14□□□□□ -0.31
CSRP1-217ENST00000533188 TP63Q9H3D4 680 aaPredicted RBP13.14□□□□□ -0.31
CSRP1-217ENST00000533188 MED17Q9NVC6 651 aa13.14□□□□□ -0.31
CSRP1-217ENST00000533188 CAMK2AQ9UQM7 478 aa13.14□□□□□ -0.31
CSRP1-217ENST00000533188 MRPS18CQ9Y3D5 142 aaKnown RBP13.14□□□□□ -0.31
CSRP1-217ENST00000533188 POLQO75417 2590 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 OR2M5A3KFT3 312 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 H3BML4 177 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 SHOX2O60902 331 aaPredicted RBP13.13□□□□□ -0.31
CSRP1-217ENST00000533188 NUDT14O95848 222 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 ACTL6AO96019 429 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 COX4I1P13073 169 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 ACVR2AP27037 513 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 MSX1P28360 303 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 GCKP35557 465 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 PGM1P36871 562 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 P2RX1P51575 399 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 SUMO3P55854 103 aaPredicted RBP13.13□□□□□ -0.31
CSRP1-217ENST00000533188 PER3P56645 1201 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 ADRM1Q16186 407 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 TMEM44Q2T9K0 475 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 RABL3Q5HYI8 236 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 COQ5Q5HYK3 327 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 EIF3MQ7L2H7 374 aaKnown RBP13.13□□□□□ -0.31
CSRP1-217ENST00000533188 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 VRK2Q86Y07 508 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 PTOV1Q86YD1 416 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 POC1BQ8TC44 478 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 WDR60Q8WVS4 1066 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 WDYHV1Q96HA8 205 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 RNF145Q96MT1 663 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 THUMPD3Q9BV44 507 aaKnown RBP13.13□□□□□ -0.31
CSRP1-217ENST00000533188 THUMPD1Q9NXG2 353 aaKnown RBP13.13□□□□□ -0.31
CSRP1-217ENST00000533188 SUCOQ9UBS9 1254 aaKnown RBP13.13□□□□□ -0.31
CSRP1-217ENST00000533188 CORO2BQ9UQ03 480 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 DOCK7Q96N67 2140 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 CELSR1Q9NYQ6 3014 aa13.13□□□□□ -0.31
CSRP1-217ENST00000533188 TMEM247A6NEH6 219 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 FIGNL2A6NMB9 653 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 EVPLLA8MZ36 301 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 E9PLN8 166 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 H0YC42 278 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 EIF4E2O60573 245 aaKnown RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ADAM11O75078 769 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 LINGO3P0C6S8 592 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ESRRAP11474 423 aaPredicted RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 NID1P14543 1247 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ZNF17P17021 662 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 POU3F2P20265 443 aaPredicted RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 IL11P20809 199 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 CHMP24386 653 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 GRNP28799 593 aaKnown RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 TPD52P55327 224 aaPredicted RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 CLDN18P56856 261 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 SRYQ05066 204 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 CYP51A1Q16850 503 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ACSF3Q4G176 576 aaPredicted RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 MRPL2Q5T653 305 aaKnown RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 C1orf185Q5T7R7 199 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 SP5Q6BEB4 398 aaPredicted RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 NANOGP8Q6NSW7 305 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 AAGABQ6PD74 315 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 PLXDC2Q6UX71 529 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 RPTNQ6XPR3 784 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ZNF836Q6ZNA1 936 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 UBQLNLQ8IYU4 475 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 OR5W2Q8NH69 310 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 GPR119Q8TDV5 335 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 OIT3Q8WWZ8 545 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 SMPDL3BQ92485 455 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 CNOT9Q92600 299 aaKnown RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 LRRC58Q96CX6 371 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 VKORC1Q9BQB6 163 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 PIGQQ9BRB3 760 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 KAT8Q9H7Z6 458 aaKnown RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 NANOGQ9H9S0 305 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 HHATLQ9HCP6 504 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 DNAJB12Q9NXW2 375 aaKnown RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ALKBH4Q9NXW9 302 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 CALML5Q9NZT1 146 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ZNF443Q9Y2A4 671 aaPredicted RBP13.12□□□□□ -0.31
CSRP1-217ENST00000533188 SLC35A3Q9Y2D2 325 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ARL2BPQ9Y2Y0 163 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 ZNF337Q9Y3M9 751 aa13.12□□□□□ -0.31
CSRP1-217ENST00000533188 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 A0A087WZY1 265 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 C7orf72A4D263 438 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 C5orf58C9J3I9 102 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 FAM47E-STBD1D6RA91 191 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 H0Y3Z8 333 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 AP3D1O14617 1153 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 SEC14L5O43304 696 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 WDR1O75083 606 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 PGM3O95394 542 aa13.11□□□□□ -0.31
CSRP1-217ENST00000533188 DBIP07108 87 aaKnown RBP13.11□□□□□ -0.31
CSRP1-217ENST00000533188 IL7RP16871 459 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms