RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 STT3AP46977 705 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 AGFG1P52594 562 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 ACTR3P61158 418 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 MRPS35P82673 323 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 MAP4K2Q12851 820 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 TP53BP2Q13625 1128 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 CCNIQ14094 377 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 FLOT2Q14254 428 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 ADRM1Q16186 407 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 CYP51A1Q16850 503 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 PRICKLE4Q2TBC4 344 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 TRMT12Q53H54 448 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 GLYATQ6IB77 296 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 BHLHB9Q6PI77 547 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 HSDL2Q6YN16 418 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 SZRD1Q7Z422 152 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 SERPINA11Q86U17 422 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 ST13P4Q8IZP2 240 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 HIPK4Q8NE63 616 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 NUP43Q8NFH3 380 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR56A1Q8NGH5 318 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 ASB9Q96DX5 294 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 C16orf58Q96GQ5 468 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 REXO5Q96IC2 774 aaKnown RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 AMBRA1Q9C0C7 1298 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 SLC6A15Q9H2J7 730 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 CXorf21Q9HAI6 301 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 GALNT8Q9NY28 637 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 MAT2BQ9NZL9 334 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 NTMQ9P121 344 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 BCAP29Q9UHQ4 241 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 C19orf53Q9UNZ5 99 aaPredicted RBP10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 SNX13Q9Y5W8 968 aa10.26□□□□□ -0.77
TRAPPC4-213ENST00000533149 A0A087WV62 115 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 SYNDIG1LA6NDD5 238 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 MBD3L3A6NE82 208 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 PLOD3O60568 738 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ENTPD5O75356 428 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 TNFRSF21O75509 655 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 SLITRK5O94991 958 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 STAMBPO95630 424 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 CT62P0C5K7 136 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 CCL3P10147 92 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 NID1P14543 1247 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 NCK1P16333 377 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 GGT1P19440 569 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 MATN1P21941 496 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 GALNSP34059 522 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 PRIM2P49643 509 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ERFP50548 548 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 RPS26P62854 115 aaKnown RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 PRR5P85299 388 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 RUNX1T1Q06455 604 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 FADDQ13158 208 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 TNK1Q13470 666 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF267Q14586 743 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 FXNQ16595 210 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 GCNT6Q5T4J0 391 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ERICH5Q6P6B1 374 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 CYP2R1Q6VVX0 501 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 PTOV1Q86YD1 416 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 OR2L13Q8N349 312 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 C7orf57Q8NEG2 295 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 BHLHE22Q8NFJ8 381 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 MBD3L2Q8NHZ7 208 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF675Q8TD23 568 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 RIT1Q92963 219 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 CTHRC1Q96CG8 243 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 SLC35G5Q96KT7 338 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 TIMP4Q99727 224 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 PELOQ9BRX2 385 aaKnown RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 SPATA9Q9BWV2 254 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 MUC13Q9H3R2 512 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 CALHM2Q9HA72 323 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZFP64Q9NPA5 681 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 YAE1D1Q9NRH1 226 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 DDX18Q9NVP1 670 aaKnown RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ZNF226Q9NYT6 803 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 C6orf203Q9P0P8 240 aaPredicted RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 ACTR3BQ9P1U1 418 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 TESMINQ9Y4I5 508 aa10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
TRAPPC4-213ENST00000533149 NUP214P35658 2090 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 KDM4EB2RXH2 506 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 CXCR6O00574 342 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 ARPC2O15144 300 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 CD5LO43866 347 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 MGRN1O60291 552 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 TMCC2O75069 709 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 NME6O75414 186 aaPredicted RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 GMNNO75496 209 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 HMGN2P05204 90 aaKnown RBP10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 IFI6P09912 130 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 RFPL3SP0C7P2 107 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 FAM157CP0CG43 387 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 BMP2P12643 396 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 ATP6V1B2P21281 511 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 S1PR1P21453 382 aa10.24□□□□□ -0.77
TRAPPC4-213ENST00000533149 PIGAP37287 484 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms