RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 EIF1P41567 113 aaKnown RBP13.84□□□□□ -0.19
CPSF1-210ENST00000532935 ASCL1P50553 236 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 DLX5P56178 289 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 RPS3AP61247 264 aaKnown RBP13.84□□□□□ -0.19
CPSF1-210ENST00000532935 GNGT1P63211 74 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 HPCAP84074 193 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 FOXF2Q12947 444 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 MAPK14Q16539 360 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 GPAT3Q53EU6 434 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 COX20Q5RI15 118 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 AP1ARQ63HQ0 302 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 FRRS1Q6ZNA5 592 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 GGNQ86UU5 652 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 TMCO5AQ8N6Q1 288 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 GPR119Q8TDV5 335 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 ZFP90Q8TF47 636 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 INTS12Q96CB8 462 aaKnown RBP13.84□□□□□ -0.19
CPSF1-210ENST00000532935 SFXN3Q9BWM7 321 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 PINK1Q9BXM7 581 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 SAP130Q9H0E3 1048 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 CSMD2Q7Z408 3487 aa13.84□□□□□ -0.19
CPSF1-210ENST00000532935 SYT5O00445 386 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 H6PDO95479 791 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ANP32DO95626 131 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ZCCHC18P0CG32 403 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 RAC1P63000 192 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 FOXF1Q12946 379 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 FGFBP1Q14512 234 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 SYPL1Q16563 259 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 FBXL19-AS1Q494R0 122 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 C6orf10Q5SRN2 563 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 FUNDC1Q8IVP5 155 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 GCNT2Q8N0V5 402 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ZNF619Q8N2I2 560 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 METTL25Q8N6Q8 603 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ANKFN1Q8N957 763 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 TOR1AIP2Q8NFQ8 470 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 OR5W2Q8NH69 310 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 RFWD2Q8NHY2 731 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 OIT3Q8WWZ8 545 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 FIG4Q92562 907 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 LRRC46Q96FV0 321 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 THOC1Q96FV9 657 aaKnown RBP13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ZNF845Q96IR2 970 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-210ENST00000532935 TRNT1Q96Q11 434 aaKnown RBP13.83□□□□□ -0.2
CPSF1-210ENST00000532935 LAT2Q9GZY6 243 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.83□□□□□ -0.2
CPSF1-210ENST00000532935 LIPT1Q9Y234 373 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 L3MBTL1Q9Y468 752 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 ZNF175Q9Y473 711 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 MPDZO75970 2070 aa13.83□□□□□ -0.2
CPSF1-210ENST00000532935 PDZD2O15018 2839 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 EEF1E1-BLOC1S5C9J1V9 151 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 EIF1AYO14602 144 aaKnown RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 EEF1E1O43324 174 aaKnown RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 EDF1O60869 148 aaKnown RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 CSTAP01040 98 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 OPN1LWP04000 364 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 IL11P20809 199 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 ME2P23368 584 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 ADH6P28332 368 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 SSTR2P30874 369 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 UQCRC1P31930 480 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 LSP1P33241 339 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 MAGEA8P43361 318 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 ATP4BP51164 291 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 CCR4P51679 360 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 MVDP53602 400 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 CHRNEQ04844 493 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 SKP2Q13309 424 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 CBFBQ13951 182 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 PON3Q15166 354 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 TOMM34Q15785 309 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 GTDC1Q4AE62 458 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 OR2A2Q6IF42 318 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 EIF3MQ7L2H7 374 aaKnown RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 FBXO27Q8NI29 283 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 FNDC9Q8TBE3 224 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 STON2Q8WXE9 905 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 GTF2H4Q92759 462 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 ZG16BQ96DA0 208 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 ARSGQ96EG1 525 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 C14orf79Q96F83 325 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 ADGRG7Q96K78 797 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 SLC38A1Q9H2H9 487 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 TMEM185BQ9H7F4 350 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 TPT1P8Q9HAU6 139 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 JKAMPQ9P055 326 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 CCDC167Q9P0B6 97 aa13.82□□□□□ -0.2
CPSF1-210ENST00000532935 GPC6Q9Y625 555 aaPredicted RBP13.82□□□□□ -0.2
CPSF1-210ENST00000532935 A0A1W2PNV4 684 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 CYP7B1O75881 506 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 CRHP06850 196 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 CHRM4P08173 479 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 UBTFL6P0CB48 400 aaPredicted RBP13.81□□□□□ -0.2
CPSF1-210ENST00000532935 NR2F1P10589 423 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 ETFAP13804 333 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 PRKCAP17252 672 aa13.81□□□□□ -0.2
CPSF1-210ENST00000532935 ELK4P28324 431 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms