RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 THAP6Q8TBB0 222 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 DIO2Q92813 273 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 UBQLN4Q9NRR5 601 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 NPIPA2E9PIF3 369 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 NPIPA3F8WFD2 350 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 RBMXL2O75526 392 aaKnown RBP14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 CTSLP07711 333 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 DNASE1P24855 282 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 PITPNBP48739 271 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 PRKCDQ05655 676 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 ZNF750Q32MQ0 723 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 SLC22A10Q63ZE4 541 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 ZNF584Q8IVC4 421 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 OR1E3Q8WZA6 343 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 MBOAT4Q96T53 435 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 SLC6A17Q9H1V8 727 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 RABL2AQ9UBK7 228 aaPredicted RBP14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 NDRG4Q9ULP0 352 aaKnown RBP14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 RABL2BQ9UNT1 228 aa14.31□□□□□ -0.12
PCDHA3-202ENST00000532566 TRIP12Q14669 1992 aaPredicted RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ETHE1O95571 254 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 JMJD7P0C870 316 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 BMP4P12644 408 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 PRPH2P23942 346 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ITGA3P26006 1051 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 HES5Q5TA89 166 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 PGBD2Q6P3X8 592 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 MBOAT2Q6ZWT7 520 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 SLC16A11Q8NCK7 471 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 OR13C2Q8NGS9 318 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 C4orf36Q96KX1 117 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 OR5M11Q96RB7 305 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 IRF2BPLQ9H1B7 796 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 OR52A5Q9H2C5 316 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 RANBP3Q9H6Z4 567 aaPredicted RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 SRPK3Q9UPE1 567 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 PLEKHA6Q9Y2H5 1048 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ERP29P30040 261 aaKnown RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 SSTR4P31391 388 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 FOXB2Q5VYV0 432 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 MFSD12Q6NUT3 480 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 PARM1Q6UWI2 310 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 OLIG3Q7RTU3 272 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 NXPE2Q96DL1 559 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 MRPL38Q96DV4 380 aaKnown RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 AK6Q9Y3D8 172 aaKnown RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ERCC1P07992 297 aaPredicted RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ARHGDIBP52566 201 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ERV3-1Q14264 604 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 MS4A6EQ96DS6 147 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ALG14Q96F25 216 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 CENPOQ9BU64 300 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 METTL8Q9H825 291 aaKnown RBP14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 ACER3Q9NUN7 267 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 RLIMQ9NVW2 624 aa14.3□□□□□ -0.12
PCDHA3-202ENST00000532566 A0A1W2PQ09 198 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 SCG5P05408 212 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 HBQ1P09105 142 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 SLC1A3P43003 542 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ADPRHP54922 357 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 DUSP6Q16828 381 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 CTU2Q2VPK5 515 aaKnown RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 PYCR3Q53H96 274 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 C19orf47Q8N9M1 422 aaKnown RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 SLC7A13Q8TCU3 470 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 CHPT1Q8WUD6 406 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 TCTN2Q96GX1 697 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 OR1F2PQ96R84 312 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 SIDT1Q9NXL6 827 aaKnown RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ZNF337Q9Y3M9 751 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 TMPRSS11DO60235 418 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 FAM219BQ5XKK7 198 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 SAXO2Q658L1 398 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 C1orf94Q6P1W5 598 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 TIGD4Q8IY51 512 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 SUN5Q8TC36 379 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ZNF582Q96NG8 517 aaPredicted RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 GABARAPL1Q9H0R8 117 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 KLHL9Q9P2J3 617 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 M0R233 179 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 FARS2O95363 451 aaKnown RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 IFNA21P01568 189 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 LIPAP38571 399 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ZNF84P51523 738 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 NKX2-5P52952 324 aaPredicted RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 WBP2NLQ6ICG8 309 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 LILRA6Q6PI73 481 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 MMP21Q8N119 569 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ANKRD19PQ9H560 264 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 DIMT1Q9UNQ2 313 aaKnown RBP14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 OR2A25A4D2G3 310 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 TNFRSF10CO14798 259 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 LAMTOR5O43504 91 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 CPNE6O95741 557 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 KIAA1024LP59773 190 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ADPRMQ3LIE5 342 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 CARD17Q5XLA6 110 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 ANKRD34AQ69YU3 496 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 GPR148Q8TDV2 347 aa14.29□□□□□ -0.12
PCDHA3-202ENST00000532566 MRPL15Q9P015 296 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms