RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 RNF224P0DH78 156 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SPI1P17947 270 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 BMP7P18075 431 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 MC4RP32245 332 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SCNN1AP37088 669 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 BDKRB1P46663 353 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 PRKXP51817 358 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CASP9P55211 416 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CLDN2P57739 230 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 POLR2LP62875 67 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RING1Q06587 406 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ALKBH1Q13686 389 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RSU1Q15404 277 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 NDUFA9Q16795 377 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 C14orf28Q4W4Y0 310 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF789Q5FWF6 425 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2B11Q5JQS5 317 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LAMTOR1Q6IAA8 161 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 C8orf82Q6P1X6 216 aaPredicted RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 B3GLCTQ6Y288 498 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF783Q6ZMS7 281 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RFLNAQ6ZTI6 216 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 GOLGA7Q7Z5G4 137 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 C11orf96Q7Z7L8 435 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CDK20Q8IZL9 346 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 BPIFCQ8NFQ6 507 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 OR52B6Q8NGF0 335 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 OR4C6Q8NH72 309 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SETD7Q8WTS6 366 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 S100A16Q96FQ6 103 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 PPP1R16AQ96I34 528 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 PIGQQ9BRB3 760 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 DPH7Q9BTV6 452 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 FAM120CQ9NX05 1096 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 VNN3Q9NY84 501 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 B4GALT6Q9UBX8 382 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RASD1Q9Y272 281 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SPTAN1Q13813 2472 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TARM1B6A8C7 271 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SMAD9O15198 467 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 FFAR2O15552 330 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LRRTM2O43300 516 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LAMTOR5O43504 91 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 FADS1O60427 444 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CYTIPO60759 359 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LILRB3O75022 631 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 EIF3GO75821 320 aaKnown RBP eCLIP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RGS9O75916 674 aaPredicted RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LATS1O95835 1130 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LGI1O95970 557 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CRYBA1P05813 215 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 HOXB3P14651 431 aaPredicted RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 PRDX3P30048 256 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 LTBRP36941 435 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RPL3P39023 403 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 MAPK8P45983 427 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 RPS25P62851 125 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SLC7A9P82251 487 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SORDQ00796 357 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 IL10RBQ08334 325 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 KIAA0141Q14154 515 aaPredicted RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 NKG7Q16617 165 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ASTLQ6HA08 431 aaPredicted RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 GDPD4Q6W3E5 623 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CBLL1Q75N03 491 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CEACAM19Q7Z692 300 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 MCATQ8IVS2 390 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 C1orf52Q8N6N3 182 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 SIDT2Q8NBJ9 832 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TERB2Q8NHR7 220 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ST7LQ8TDW4 575 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TRMT2BQ96GJ1 504 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 MEGF10Q96KG7 1140 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2M4Q96R27 311 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TBX5Q99593 518 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 EDEM2Q9BV94 578 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 KATNB1Q9BVA0 655 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 DPEP2Q9H4A9 486 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 FAM124BQ9H5Z6 455 aaPredicted RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 OR2S2Q9NQN1 319 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 CLEC2DQ9UHP7 191 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 FARSAQ9Y285 508 aaKnown RBP6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 THSD7BQ9C0I4 1608 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 ACACAQ13085 2346 aa6.37□□□□□ -1.39
TGFBR3-209ENST00000532540 TERTO14746 1132 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 MAFKO60675 156 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 NDUFS6O75380 124 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 S1PR4O95977 384 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 PRH1P02810 166 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 ANXA2P07355 339 aaKnown RBP6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 OSMP13725 252 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 AHCYP23526 432 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CPT2P23786 658 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GABRA5P31644 462 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CSF2RBP32927 897 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 GLP1RP43220 463 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 MTNR1AP48039 350 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 BTN3A2P78410 334 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 CDK6Q00534 326 aa6.36□□□□□ -1.39
TGFBR3-209ENST00000532540 RBM39Q14498 530 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms