RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 NRG3P56975 720 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SNRPNP63162 240 aaKnown RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 BTG2P78543 158 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 CFHR1Q03591 330 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 POU4F2Q12837 409 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 MLLT11Q13015 90 aaPredicted RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 EFR3AQ14156 821 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 NSDHLQ15738 373 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SYT16Q17RD7 645 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PGGHGQ32M88 737 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 ALG10BQ5I7T1 473 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PDZK1Q5T2W1 519 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 CCNJQ5T5M9 372 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 C19orf48Q6RUI8 117 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SMARCD3Q6STE5 483 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SLC46A3Q7Z3Q1 461 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 NKAIN4Q8IVV8 208 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 LNX2Q8N448 690 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 POGLUT1Q8NBL1 392 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PSD4Q8NDX1 1056 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 FAM71CQ8NEG0 241 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 LIPHQ8WWY8 451 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 METTL21AQ8WXB1 218 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PIGKQ92643 395 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 BORCS5Q969J3 196 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 UBE2FQ969M7 185 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 BPIFA2Q96DR5 249 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 MRPL48Q96GC5 212 aaKnown RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 LRR1Q96L50 414 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 DACH2Q96NX9 599 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 PRSS27Q9BQR3 290 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 WFDC6Q9BQY6 131 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 TMEM43Q9BTV4 400 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 SLC26A1Q9H2B4 701 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 CAPN10Q9HC96 672 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 HMG20AQ9NP66 347 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 GPR83Q9NYM4 423 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 KLHL3Q9UH77 587 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 ZNF223Q9UK11 482 aaPredicted RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 PPIEQ9UNP9 301 aaKnown RBP11.33□□□□□ -0.6
CHD7-211ENST00000532149 PCDHGA5Q9Y5G8 931 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 KNL1Q8NG31 2342 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 NUP210LQ5VU65 1888 aa11.33□□□□□ -0.6
CHD7-211ENST00000532149 GON4LQ3T8J9 2241 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 A0A087WUJ7 227 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 SLC22A31A6NKX4 558 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 EFCAB9A8MZ26 197 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 PEX12O00623 359 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 MYL12BO14950 172 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 SURF4O15260 269 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 AIREO43918 545 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 MED26O95402 600 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 SOX14O95416 240 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 ADORA3P0DMS8 318 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 GAAP10253 952 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 FOLR1P15328 257 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 PSMA1P25786 263 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 PCSK6P29122 969 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 HTR1FP30939 366 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 SLC6A6P31641 620 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 CSF2RBP32927 897 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 ACAA2P42765 397 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 RGS6P49758 472 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 MAP2K6P52564 334 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 PRPS1P60891 318 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 DCDP81605 110 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 BNC1Q01954 994 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 BDH1Q02338 343 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 CSTF1Q05048 431 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 ZNF91Q05481 1191 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 ACSM1Q08AH1 577 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 DMWDQ09019 674 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 GPR50Q13585 617 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 SPHARQ15513 63 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 ARMCX4Q5H9R4 360 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 TMEM236Q5W0B7 351 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 LAIR1Q6GTX8 287 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 TUBA3EQ6PEY2 450 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 Q6ZPB1 254 aaPredicted RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 SLC16A12Q6ZSM3 486 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 WDR53Q7Z5U6 358 aaPredicted RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 SLC34A3Q8N130 599 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 NANOGP1Q8N7R0 232 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 GALNT6Q8NCL4 622 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 OR5L2Q8NGL0 311 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 ZHX1-C8orf76Q96EF9 292 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 FAM46AQ96IP4 442 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 ZNF582Q96NG8 517 aaPredicted RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 MGLLQ99685 303 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 FAM117AQ9C073 453 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 WDR12Q9GZL7 423 aaKnown RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 LAT2Q9GZY6 243 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 MMP27Q9H306 513 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 GAREM1Q9H706 876 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 AKAP7Q9P0M2 348 aaPredicted RBP11.32□□□□□ -0.6
CHD7-211ENST00000532149 KCNE5Q9UJ90 142 aa11.32□□□□□ -0.6
CHD7-211ENST00000532149 KLHL21Q9UJP4 597 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms