RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PRKAR1BP31321 381 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 GSK3BP49841 420 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 EEF1A1P68104 462 aaKnown RBP20.21■□□□□ 0.83
LRRK1-208ENST00000532029 CBX1P83916 185 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 ZNF440Q8IYI8 595 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 GPR119Q8TDV5 335 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 SLC26A7Q8TE54 656 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 ARSGQ96EG1 525 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 DNAJB12Q9NXW2 375 aaKnown RBP20.21■□□□□ 0.83
LRRK1-208ENST00000532029 TMEM181Q9P2C4 612 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 SLC13A4Q9UKG4 626 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 SHANK1Q9Y566 2161 aa20.21■□□□□ 0.83
LRRK1-208ENST00000532029 NCKAP5O14513 1909 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 CDHR4A6H8M9 788 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 OR14I1A6ND48 311 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 NPIPA2E9PIF3 369 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 NPIPA3F8WFD2 350 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 M0QX08 132 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 GSTA4O15217 222 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 BCAS1O75363 584 aaPredicted RBP20.2■□□□□ 0.82
LRRK1-208ENST00000532029 T-ENOLP0DO92 83 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 RYKP34925 604 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 SLC6A8P48029 635 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 AAGABQ6PD74 315 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 DHRS4L2Q6PKH6 230 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 DEFB107AQ8IZN7 70 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 BHLHE22Q8NFJ8 381 aaPredicted RBP20.2■□□□□ 0.82
LRRK1-208ENST00000532029 TNIP2Q8NFZ5 429 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 ZBTB8AQ96BR9 441 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 KCTD14Q9BQ13 255 aaPredicted RBP20.2■□□□□ 0.82
LRRK1-208ENST00000532029 PIGQQ9BRB3 760 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 RLIMQ9NVW2 624 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 SPRR3Q9UBC9 169 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 ACAD8Q9UKU7 415 aa20.2■□□□□ 0.82
LRRK1-208ENST00000532029 J3QKU1 62 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 BCKDKO14874 412 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ZNHIT1O43257 154 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 SLC19A2O60779 497 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ACTL6AO96019 429 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 TPOP07202 933 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 UQCRBP14927 111 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 UQCRFS1P47985 274 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 CASP6P55212 293 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.19■□□□□ 0.82
LRRK1-208ENST00000532029 PLPPR5Q32ZL2 321 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 NHSL2Q5HYW2 709 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 CCDC80Q76M96 950 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ZNF550Q7Z398 422 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 FGD2Q7Z6J4 655 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 GRAMD2AQ8IUY3 354 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 CHERPQ8IWX8 916 aaKnown RBP20.19■□□□□ 0.82
LRRK1-208ENST00000532029 CLIP4Q8N3C7 705 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 RBM15BQ8NDT2 890 aaKnown RBP20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ZNF563Q8TA94 476 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ABTB1Q969K4 478 aaPredicted RBP20.19■□□□□ 0.82
LRRK1-208ENST00000532029 CDRT15Q96T59 188 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 KLHDC3Q9BQ90 382 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 KLHL28Q9NXS3 571 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 GMPR2Q9P2T1 348 aaKnown RBP20.19■□□□□ 0.82
LRRK1-208ENST00000532029 OSGIN2Q9Y236 505 aa20.19■□□□□ 0.82
LRRK1-208ENST00000532029 ZNF462Q96JM2 2506 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 OR2M5A3KFT3 312 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 CFAP73A6NFT4 308 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 PYCARD-AS1I3L0S3 204 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 PRRG2O14669 202 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 GCM2O75603 506 aaPredicted RBP20.18■□□□□ 0.82
LRRK1-208ENST00000532029 MFN2O95140 757 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 IFNA14P01570 189 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 OPN1SWP03999 348 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 LINGO3P0C6S8 592 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 ZNF17P17021 662 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 BMP7P18075 431 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 CHMP24386 653 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 EIF1P41567 113 aaKnown RBP20.18■□□□□ 0.82
LRRK1-208ENST00000532029 B3GALT5-AS1P59052 145 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 PLAURQ03405 335 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 QPRTQ15274 297 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 SAMD4BQ5PRF9 694 aaKnown RBP20.18■□□□□ 0.82
LRRK1-208ENST00000532029 WLSQ5T9L3 541 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 VASNQ6EMK4 673 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 ENPP6Q6UWR7 440 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 RINLQ6ZS11 566 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 SMYD1Q8NB12 490 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 OR5M1Q8NGP8 315 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 FAM57AQ8TBR7 257 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 RASSF5Q8WWW0 418 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 TMEM234Q8WY98 164 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 PINK1Q9BXM7 581 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 UGT2B28Q9BY64 529 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 TNFRSF10DQ9UBN6 386 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 ZNF835Q9Y2P0 537 aa20.18■□□□□ 0.82
LRRK1-208ENST00000532029 C7orf72A4D263 438 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 SHISA8B8ZZ34 492 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 LINC01387J3KSC0 135 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 CPOXP36551 454 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 GFRA1P56159 465 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 CRYZQ08257 329 aaKnown RBP20.17■□□□□ 0.82
LRRK1-208ENST00000532029 DMTNQ08495 405 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 FOXF1Q12946 379 aa20.17■□□□□ 0.82
LRRK1-208ENST00000532029 TOMM34Q15785 309 aaPredicted RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms