RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 GCNT2Q8N0V5 402 aa13.97□□□□□ -0.17
CTSB-220ENST00000531089 SH3YL1Q96HL8 342 aaPredicted RBP13.97□□□□□ -0.17
CTSB-220ENST00000531089 INPP5KQ9BT40 448 aa13.97□□□□□ -0.17
CTSB-220ENST00000531089 VDAC3Q9Y277 283 aa13.97□□□□□ -0.17
CTSB-220ENST00000531089 DTNAQ9Y4J8 743 aa13.97□□□□□ -0.17
CTSB-220ENST00000531089 HEATR5AQ86XA9 2040 aa13.97□□□□□ -0.17
CTSB-220ENST00000531089 NPIPA5A0A0B4J1W7 369 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 NPIPA7E9PJI5 369 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 FCMRO60667 390 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 KRT75O95678 551 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 NPIPA8P0DM63 369 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 DNASE1P24855 282 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 CDKN2CP42773 168 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 KHKP50053 298 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 ZNF41P51814 821 aaPredicted RBP13.96□□□□□ -0.18
CTSB-220ENST00000531089 TXNL4AP83876 142 aaKnown RBP13.96□□□□□ -0.18
CTSB-220ENST00000531089 HEPHL1Q6MZM0 1159 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 TNFAIP8L2Q6P589 184 aaPredicted RBP13.96□□□□□ -0.18
CTSB-220ENST00000531089 MEIOBQ8N635 442 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 ZNF614Q8N883 585 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 OR5M1Q8NGP8 315 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 RAB8BQ92930 207 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 STARD4Q96DR4 205 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 ITCHQ96J02 903 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 EBF4Q9BQW3 602 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 NMUR2Q9GZQ4 415 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 PIGMQ9H3S5 423 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 ZNF446Q9NWS9 450 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 GALNT8Q9NY28 637 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 MKLN1Q9UL63 735 aa13.96□□□□□ -0.18
CTSB-220ENST00000531089 A0A1W2PPR1 153 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 FAM234BA2RU67 622 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 NPIPB9F8W1W9 429 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 H0YC42 278 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 H3BML4 177 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 TPD52P55327 224 aaPredicted RBP13.95□□□□□ -0.18
CTSB-220ENST00000531089 EEF1A1P68104 462 aaKnown RBP13.95□□□□□ -0.18
CTSB-220ENST00000531089 CD226Q15762 336 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 EEF1A1P5Q5VTE0 462 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 MSANTD1Q6ZTZ1 278 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 RNF130Q86XS8 419 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 GRAMD2AQ8IUY3 354 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 UBQLNLQ8IYU4 475 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 ZBTB8AQ96BR9 441 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 ROPN1LQ96C74 230 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 MBD6Q96DN6 1003 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 DACH2Q96NX9 599 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 EDARQ9UNE0 448 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 CARD8Q9Y2G2 431 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 WDR45Q9Y484 360 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 AP4B1Q9Y6B7 739 aa13.95□□□□□ -0.18
CTSB-220ENST00000531089 NAV3Q8IVL0 2385 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 A0A1W2PNV4 684 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 TNFRSF21O75509 655 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 NUDT14O95848 222 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 HRGP04196 525 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 CRHP06850 196 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 GUSBP08236 651 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 KIR2DL2P43627 348 aaPredicted RBP13.94□□□□□ -0.18
CTSB-220ENST00000531089 MRPL19P49406 292 aaKnown RBP13.94□□□□□ -0.18
CTSB-220ENST00000531089 P2RX1P51575 399 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 IRX1P78414 480 aaPredicted RBP13.94□□□□□ -0.18
CTSB-220ENST00000531089 FAM27E3Q08E93 113 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 ZNF141Q15928 474 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 TMEM44Q2T9K0 475 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 GPAT3Q53EU6 434 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.94□□□□□ -0.18
CTSB-220ENST00000531089 PDZK1Q5T2W1 519 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 P4HA3Q7Z4N8 544 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 ARFGAP2Q8N6H7 521 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 OR9I1Q8NGQ6 314 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 FIG4Q92562 907 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 VPS33AQ96AX1 596 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 ZNF350Q9GZX5 532 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 POLE3Q9NRF9 147 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 MED17Q9NVC6 651 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 LIPT1Q9Y234 373 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 PRR14LQ5THK1 2151 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 ARID1AO14497 2285 aa13.94□□□□□ -0.18
CTSB-220ENST00000531089 FLNAP21333 2647 aaKnown RBP13.93□□□□□ -0.18
CTSB-220ENST00000531089 SERINC4A6NH21 518 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 SHISA8B8ZZ34 492 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 HMGN4O00479 90 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 MSTNO14793 375 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 ZNF264O43296 627 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 EIF4E2O60573 245 aaKnown RBP13.93□□□□□ -0.18
CTSB-220ENST00000531089 UGT2B17O75795 530 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 ATE1O95260 518 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 ZCCHC18P0CG32 403 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 ZNF17P17021 662 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 KLK2P20151 261 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 EIF1P41567 113 aaKnown RBP13.93□□□□□ -0.18
CTSB-220ENST00000531089 MAGEA8P43361 318 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 SUMO3P55854 103 aaPredicted RBP13.93□□□□□ -0.18
CTSB-220ENST00000531089 RPS3AP61247 264 aaKnown RBP13.93□□□□□ -0.18
CTSB-220ENST00000531089 ADAM8P78325 824 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 HPCAP84074 193 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 ZNF117Q03924 483 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 PLPPR5Q32ZL2 321 aa13.93□□□□□ -0.18
CTSB-220ENST00000531089 HSP90B2PQ58FF3 399 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms