RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 VSX2P58304 361 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 STARD6P59095 220 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 VBP1P61758 197 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SHC2P98077 582 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 BNC1Q01954 994 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ACSM1Q08AH1 577 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 MGAT2Q10469 447 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GPR50Q13585 617 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TPBGQ13641 420 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GRM7Q14831 915 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 MED22Q15528 200 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF141Q15928 474 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SNAPC1Q16533 368 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF181Q2M3W8 571 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 PGGHGQ32M88 737 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF750Q32MQ0 723 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 LEXMQ3ZCV2 418 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 NXNL2Q5VZ03 156 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF836Q6ZNA1 936 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF620Q6ZNG0 422 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 Q6ZPB1 254 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 TMPRSS11FQ6ZWK6 438 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF550Q7Z398 422 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 NUP54Q7Z3B4 507 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GDF7Q7Z4P5 450 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 VRK2Q86Y07 508 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 KMT5CQ86Y97 462 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 RBM45Q8IUH3 476 aaKnown RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 EGFL6Q8IUX8 553 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SLITRK4Q8IW52 837 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SPEM1Q8N4L4 309 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SLC15A4Q8N697 577 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 NANOGP1Q8N7R0 232 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TCEANCQ8N8B7 351 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 LSMEM1Q8N8F7 131 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 POGLUT1Q8NBL1 392 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 PSD4Q8NDX1 1056 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 OR2T33Q8NG76 320 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 OR7G1Q8NGA0 311 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 OR52L1Q8NGH7 329 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 OR52N1Q8NH53 320 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SLC2A12Q8TD20 617 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GPR151Q8TDV0 419 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 JPH3Q8WXH2 748 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 UCN3Q969E3 161 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ANKRD9Q96BM1 317 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 RBM18Q96H35 190 aaKnown RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 ABHD8Q96I13 439 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 COX4I2Q96KJ9 171 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 LRR1Q96L50 414 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF582Q96NG8 517 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 OR1F2PQ96R84 312 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 IL4I1Q96RQ9 567 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 RHNO1Q9BSD3 238 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 YIPF4Q9BSR8 244 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TSSK6Q9BXA6 273 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 RSPO3Q9BXY4 272 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 SLC19A3Q9BZV2 496 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 HOXD1Q9GZZ0 328 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 DSN1Q9H410 356 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 LMAN1LQ9HAT1 526 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TMEM27Q9HBJ8 222 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 Q9N2J8 555 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 PDE7BQ9NP56 450 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ADAP2Q9NPF8 381 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 CD93Q9NPY3 652 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 INPP5EQ9NRR6 644 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 NDUFB11Q9NX14 153 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TVP23BQ9NYZ1 205 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SEMA5BQ9P283 1151 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 KLHL3Q9UH77 587 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GMEB2Q9UKD1 530 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 MRTO4Q9UKD2 239 aaKnown RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 NDRG2Q9UN36 371 aaKnown RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 STUB1Q9UNE7 303 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 CLCA2Q9UQC9 943 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 KCNE3Q9Y6H6 103 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 MN1Q10571 1320 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 CEP290O15078 2479 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 TRBV23OR9-2A0A075B6M9 112 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 FAM86C2PA6NEL3 165 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 UNC119BA6NIH7 251 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 CPSF4LA6NMK7 179 aaKnown RBP5.14□□□□□ -1.59
PCF11-205ENST00000530906 B4DGG1 531 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 ZNF670-ZNF695F2Z2N8 137 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 LOC110117498-PIK3R3F6TDL0 507 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 SCAMP1O15126 338 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 SURF4O15260 269 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 AQP9O43315 295 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 TLX2O43763 284 aaPredicted RBP5.14□□□□□ -1.59
PCF11-205ENST00000530906 AKAP8O43823 692 aaKnown RBP5.14□□□□□ -1.59
PCF11-205ENST00000530906 FCMRO60667 390 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 HCN1O60741 890 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 PFDN1O60925 122 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 RDH16O75452 317 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 PPM1BO75688 479 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 SULT1C4O75897 302 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 CBX7O95931 251 aa5.14□□□□□ -1.59
PCF11-205ENST00000530906 IL1AP01583 271 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms