RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 FADDQ13158 208 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 FGFBP1Q14512 234 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 HIST2H2BCQ6DN03 193 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 DLEU7Q6UYE1 221 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 RETREG3Q86VR2 466 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 DPP10Q8N608 796 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 TOR1AIP2Q8NFQ8 470 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 OR5W2Q8NH69 310 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 POC1BQ8TC44 478 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 SLC38A5Q8WUX1 472 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 ARSGQ96EG1 525 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 UCN2Q96RP3 112 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 QRSL1Q9H0R6 528 aaKnown RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 SAR1AQ9NR31 198 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 CALML5Q9NZT1 146 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 Q9UFV3 132 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 SLC35A3Q9Y2D2 325 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 L3MBTL1Q9Y468 752 aa11.44□□□□□ -0.58
CCDC90B-216ENST00000529856 KIAA1549Q9HCM3 1950 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 MBD3L4A6NDZ8 208 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 MBD3L3A6NE82 208 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 MBD3L5A6NJ08 208 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 CLCA1A8K7I4 914 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 HSPB2A8KAH6 182 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 H3BML4 177 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 ANGPT2O15123 496 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 NUDT14O95848 222 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 IL2RAP01589 272 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 RPS4Y1P22090 263 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 GRNP28799 593 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 SUCLG1P53597 346 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 CRISP3P54108 245 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 CLDN20P56880 219 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 EEFSECP57772 596 aaKnown RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 SKP2Q13309 424 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 CBFBQ13951 182 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 TOMM34Q15785 309 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 HSPB2Q16082 182 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 RUNDC3AQ59EK9 446 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 SP5Q6BEB4 398 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 HMGN2P46Q86SG4 172 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 LIX1LQ8IVB5 337 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 UBQLNLQ8IYU4 475 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 MEIOBQ8N635 442 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 FAM71CQ8NEG0 241 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 TNIP2Q8NFZ5 429 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 MBD3L2Q8NHZ7 208 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 C10orf82Q8WW14 230 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 WNT2BQ93097 391 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 ZNF524Q96C55 264 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 RNF145Q96MT1 663 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 A4GALTQ9NPC4 353 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 STOML1Q9UBI4 398 aa11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 GPC6Q9Y625 555 aaPredicted RBP11.43□□□□□ -0.58
CCDC90B-216ENST00000529856 DSPPQ9NZW4 1301 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 A0A0G2JPF8 293 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 TMEM247A6NEH6 219 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CLDN24A6NM45 220 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 HNRNPCL2B2RXH8 293 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 HNRNPCL3B7ZW38 293 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 H0YC42 278 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 HNRNPCL1O60812 293 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 BCAS1O75363 584 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CYP7B1O75881 506 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 BCHEP06276 602 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 NUDT7P0C024 238 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 UBTFL6P0CB48 400 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 HNRNPCL4P0DMR1 293 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 IL7RP16871 459 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 GPX2P18283 190 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 ADH6P28332 368 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 ADSLP30566 484 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 TPD52P55327 224 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 RAC1P63000 192 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 FOXF1Q12946 379 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 KLF10Q13118 480 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 GNA13Q14344 377 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 SLC25A53Q5H9E4 307 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CHMP1BQ7LBR1 199 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 DHDDSQ86SQ9 333 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 GGNQ86UU5 652 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CMIPQ8IY22 773 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 PEX5LQ8IYB4 626 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 C10orf111Q8N326 155 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 TMCO5AQ8N6Q1 288 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 C9orf106Q8NAJ2 232 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 NAXEQ8NCW5 288 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 FBXO27Q8NI29 283 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 SMPDL3BQ92485 455 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 TMEM19Q96HH6 336 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 TREX2Q9BQ50 279 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CPPED1Q9BRF8 314 aaPredicted RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 THUMPD3Q9BV44 507 aaKnown RBP11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 UCK2Q9BZX2 261 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 IKZF5Q9H5V7 419 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 CHST11Q9NPF2 352 aa11.42□□□□□ -0.58
CCDC90B-216ENST00000529856 EXOSC3Q9NQT5 275 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms