RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CLDN19Q8N6F1 224 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 CSNK1A1LQ8N752 337 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 SYT14Q8NB59 555 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 OR6C4Q8NGE1 309 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 TRMT10AQ8TBZ6 339 aaKnown RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 SDSLQ96GA7 329 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 TPD52L3Q96J77 140 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 C7orf34Q96L11 122 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 AMDHD1Q96NU7 426 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 RANBP9Q96S59 729 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 PLIN2Q99541 437 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 CITED1Q99966 193 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 APOL2Q9BQE5 337 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 EDEM2Q9BV94 578 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 PNNQ9H307 717 aaKnown RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 GLRX2Q9NS18 164 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 PRR34Q9NV39 138 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 WRAP73Q9P2S5 460 aaPredicted RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF221Q9UK13 617 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 NPIPA1Q9UND3 350 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 SAMD4AQ9UPU9 718 aaKnown RBP3.49□□□□□ -1.85
C11orf88-204ENST00000529661 POGZQ7Z3K3 1410 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 ZNF318Q5VUA4 2279 aa3.49□□□□□ -1.85
C11orf88-204ENST00000529661 LRRIQ4A6NIV6 560 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 SAGE2PA6NJ88 616 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 A8MX80 341 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 E9PBE3 544 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 H0YIV9 168 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 OR7A17O14581 309 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 ARPC3O15145 178 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 HPP00738 406 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 ASGR1P07306 291 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 CALB2P22676 271 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 RFC4P35249 363 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 VLDLRP98155 873 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 RUNX3Q13761 415 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 SLC10A1Q14973 349 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 NDUFA9Q16795 377 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 SLC5A12Q1EHB4 618 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 HSP90AB3PQ58FF7 597 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 OR8G2PQ6IF36 304 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 FAHD2BQ6P2I3 314 aaPredicted RBP3.48□□□□□ -1.85
C11orf88-204ENST00000529661 C16orf87Q6PH81 154 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 APTXQ7Z2E3 356 aaKnown RBP3.48□□□□□ -1.85
C11orf88-204ENST00000529661 KIAA1328Q86T90 577 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 C9orf40Q8IXQ3 194 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 BBS5Q8N3I7 341 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 C15orf54Q8N8G6 183 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 Q8N9G6 341 aaPredicted RBP3.48□□□□□ -1.85
C11orf88-204ENST00000529661 VN1R17PQ8TDU5 208 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 AGAP11Q8TF27 550 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 ARNTL2Q8WYA1 636 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 FAHD2AQ96GK7 314 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 TMEM80Q96HE8 168 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 SH3YL1Q96HL8 342 aaPredicted RBP3.48□□□□□ -1.85
C11orf88-204ENST00000529661 C12orf66Q96MD2 445 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 PSKH2Q96QS6 385 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 SECISBP2Q96T21 854 aaKnown RBP3.48□□□□□ -1.85
C11orf88-204ENST00000529661 DUSP16Q9BY84 665 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 CRLF2Q9HC73 371 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 CUTCQ9NTM9 273 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 C6orf203Q9P0P8 240 aaPredicted RBP3.48□□□□□ -1.85
C11orf88-204ENST00000529661 PNPLA6Q8IY17 1366 aa3.48□□□□□ -1.85
C11orf88-204ENST00000529661 ATP10AO60312 1499 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 A0A0U1RQS6 177 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.47□□□□□ -1.85
C11orf88-204ENST00000529661 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ERICH4A6NGS2 130 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 E9PLD3 99 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 PES1O00541 588 aaKnown RBP3.47□□□□□ -1.85
C11orf88-204ENST00000529661 MSH4O15457 936 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 BCL2L11O43521 198 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 LATO43561 262 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ERLIN1O75477 346 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 SCRG1O75711 98 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 RHBDL1O75783 438 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 BBOX1O75936 387 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 NOL4O94818 638 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 CAPN1P07384 714 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 H2BFMP0C1H6 154 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 PGAM2P15259 253 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 AZU1P20160 251 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 GALP22466 123 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 AP3M2P53677 418 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 IST1P53990 364 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 TNFRSF17Q02223 184 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ST3GAL3Q11203 375 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 LAGE3Q14657 143 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 MESDQ14696 234 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 PPP1R7Q15435 360 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 TIGITQ495A1 244 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 KCTD21Q4G0X4 260 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 SLC22A6Q4U2R8 563 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ACSM5Q6NUN0 579 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 SYT10Q6XYQ8 523 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 ACOT1Q86TX2 421 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 OR10A7Q8NGE5 316 aa3.47□□□□□ -1.85
C11orf88-204ENST00000529661 BADQ92934 168 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms