RNA–Protein interactions for RNA: ENST00000529464.5

FDFT1-215, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-215ENST00000529464 TSC22D1Q15714 1073 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 NDUFAF6Q330K2 333 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 CBLN3Q6UW01 205 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 PLEKHM3Q6ZWE6 761 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 OR7A2PQ8NGA2 310 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 B4GALNT2Q8NHY0 566 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 ACTRT2Q8TDY3 377 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 ABHD3Q8WU67 409 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 TWIST2Q8WVJ9 160 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 OSTF1Q92882 214 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 ZNF524Q96C55 264 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 PLPPR2Q96GM1 343 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 SRXN1Q9BYN0 137 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 CCDC134Q9H6E4 229 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 UBQLN4Q9NRR5 601 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 ZCCHC3Q9NUD5 404 aaKnown RBP12.72□□□□□ -0.37
FDFT1-215ENST00000529464 KCNE3Q9Y6H6 103 aa12.72□□□□□ -0.37
FDFT1-215ENST00000529464 SCAMP2O15127 329 aaKnown RBP12.71□□□□□ -0.37
FDFT1-215ENST00000529464 LAMP1P11279 417 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ME2P23368 584 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 NR1H2P55055 460 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 TOMM34Q15785 309 aaPredicted RBP12.71□□□□□ -0.37
FDFT1-215ENST00000529464 UGT3A2Q3SY77 523 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ATG16L1Q676U5 607 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 PRSS57Q6UWY2 283 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ESPNLQ6ZVH7 1005 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 NUFIP2Q7Z417 695 aaKnown RBP12.71□□□□□ -0.37
FDFT1-215ENST00000529464 PRIMA1Q86XR5 153 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 LILRA2Q8N149 483 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ZNF781Q8N8C0 355 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ATP6V1C2Q8NEY4 427 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 FBXO27Q8NI29 283 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 PHOSPHO1Q8TCT1 267 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 C1orf50Q9BV19 199 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 BTBD2Q9BX70 525 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 GSX2Q9BZM3 304 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 CXorf36Q9H7Y0 433 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 PNPOQ9NVS9 261 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 STOML1Q9UBI4 398 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ATP6V1HQ9UI12 483 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 ZDHHC2Q9UIJ5 367 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 CARD8Q9Y2G2 431 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 SNX8Q9Y5X2 465 aa12.71□□□□□ -0.37
FDFT1-215ENST00000529464 A0A1W2PQD3 144 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 KIAA1324LA8MWY0 1029 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-215ENST00000529464 PEX11AO75192 247 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 CNOT4O95628 575 aaKnown RBP12.7□□□□□ -0.38
FDFT1-215ENST00000529464 HSPA4LO95757 839 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 CHEK2O96017 543 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 NID1P14543 1247 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 PPP3CBP16298 524 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 SERPINB5P36952 375 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 HPCAL1P37235 193 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 ASMTP46597 345 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 CARD18P57730 90 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 TP53BP2Q13625 1128 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 PTGR1Q14914 329 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 ZNF239Q16600 458 aaKnown RBP12.7□□□□□ -0.38
FDFT1-215ENST00000529464 RNF165Q6ZSG1 346 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 ATG4DQ86TL0 474 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-215ENST00000529464 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 ZNF619Q8N2I2 560 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 KRTCAP2Q8N6L1 136 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 S100PBPQ96BU1 408 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 MTERF3Q96E29 417 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 C3orf30Q96M34 536 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 ZNF317Q96PQ6 595 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-215ENST00000529464 TRMOQ9BU70 441 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 BDH2Q9BUT1 245 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 PIGUQ9H490 435 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 THAP1Q9NVV9 213 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 PAQR5Q9NXK6 330 aaPredicted RBP12.7□□□□□ -0.38
FDFT1-215ENST00000529464 HAO1Q9UJM8 370 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 TRAF6Q9Y4K3 522 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 JMJD1CQ15652 2540 aa12.7□□□□□ -0.38
FDFT1-215ENST00000529464 PCNX3Q9H6A9 2034 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 IGHV3-15A0A0B4J1V0 119 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 FAM171A2A8MVW0 826 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 INAFM1C9JVW0 142 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 GCM2O75603 506 aaPredicted RBP12.69□□□□□ -0.38
FDFT1-215ENST00000529464 NUDT14O95848 222 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 C6orf47O95873 294 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 LSP1P33241 339 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 GNGT1P63211 74 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 KLHL26Q53HC5 615 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 CDC73Q6P1J9 531 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 ZCCHC12Q6PEW1 402 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 BEND4Q6ZU67 534 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 OLIG3Q7RTU3 272 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 R3HCC1LQ7Z5L2 792 aaKnown RBP12.69□□□□□ -0.38
FDFT1-215ENST00000529464 STK32CQ86UX6 486 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 LSRQ86X29 649 aaPredicted RBP12.69□□□□□ -0.38
FDFT1-215ENST00000529464 TUSC5Q8IXB3 177 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 LRRC34Q8IZ02 419 aa12.69□□□□□ -0.38
FDFT1-215ENST00000529464 TMEM171Q8WVE6 324 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms