RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 LAT2Q9GZY6 243 aa22.55■■□□□ 1.2
LDLRAD3-203ENST00000528989 NTN4Q9HB63 628 aa22.55■■□□□ 1.2
LDLRAD3-203ENST00000528989 CNIH4Q9P003 139 aa22.55■■□□□ 1.2
LDLRAD3-203ENST00000528989 STX18Q9P2W9 335 aaKnown RBP22.55■■□□□ 1.2
LDLRAD3-203ENST00000528989 TESMINQ9Y4I5 508 aa22.55■■□□□ 1.2
LDLRAD3-203ENST00000528989 OR5H15A6NDH6 313 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 PRSS23O95084 383 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 P04436 131 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 CD97P48960 835 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 DNASE1L1P49184 302 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 SESN3P58005 492 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 ARG2P78540 354 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 SNTA1Q13424 505 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 TOMM34Q15785 309 aaPredicted RBP22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 COL28A1Q2UY09 1125 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 OR52J3Q8NH60 311 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 EXTL1Q92935 676 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 YY1AP1Q9H869 796 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 KLHL1Q9NR64 748 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 RIMS3Q9UJD0 308 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 FAM32AQ9Y421 112 aaKnown RBP22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 PCNX3Q9H6A9 2034 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 THY1P04216 161 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 RHCEP18577 417 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 EPS8Q12929 822 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 SLC30A6Q6NXT4 461 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 TMEM81Q6P7N7 255 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 BORAQ6PGQ7 559 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 ADAMTS16Q8TE57 1224 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 NTNG2Q96CW9 530 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 JSRP1Q96MG2 331 aaPredicted RBP22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 SACM1LQ9NTJ5 587 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 PPP4R1LQ9P1A2 415 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 FBXL2Q9UKC9 423 aa22.54■■□□□ 1.2
LDLRAD3-203ENST00000528989 K7EM74 188 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 GNB5O14775 395 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 WISP1O95388 367 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 NTN1O95631 604 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 LINGO3P0C6S8 592 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 ITGA2P17301 1181 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 RRM2P31350 389 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 UCNP55089 124 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 RPP38P78345 283 aaKnown RBP22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 ATP6AP1Q15904 470 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 TBR1Q16650 682 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 ZSWIM7Q19AV6 140 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 OR2T5Q6IEZ7 315 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 IGFL2Q6UWQ7 119 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 ZNF550Q7Z398 422 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 MDS2Q8NDY4 140 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 OR2T29Q8NH02 315 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 B4GALNT2Q8NHY0 566 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 FRMD6Q96NE9 622 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 GNRHR2Q96P88 292 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 SMAD5Q99717 465 aaKnown RBP22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 PIP5K1AQ99755 562 aa22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 NMNAT1Q9HAN9 279 aaPredicted RBP22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 EXOSC3Q9NQT5 275 aaKnown RBP22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 RYDENQ9NUL5 291 aaKnown RBP22.53■■□□□ 1.2
LDLRAD3-203ENST00000528989 ANKRD33BA6NCL7 494 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 EIF4E2O60573 245 aaKnown RBP22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 NUDT14O95848 222 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 OR1Q1Q15612 314 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 ZNF605Q86T29 641 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 RANBP3LQ86VV4 465 aaPredicted RBP22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 MISPQ8IVT2 679 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 DSN1Q9H410 356 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 TIMMDC1Q9NPL8 285 aa22.52■■□□□ 1.2
LDLRAD3-203ENST00000528989 SPENQ96T58 3664 aaKnown RBP22.52■■□□□ 1.19
LDLRAD3-203ENST00000528989 PINLYPA6NC86 204 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 GNGT2O14610 69 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 CDC40O60508 579 aaKnown RBP eCLIP22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 LDLRP01130 860 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 PDGFAP04085 211 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 MST1P26927 711 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 IDH2P48735 452 aaKnown RBP22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 P2RX1P51575 399 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 LAPTM4AQ15012 233 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 TMEM179BQ7Z7N9 219 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 CADM2Q8N3J6 435 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 OR5W2Q8NH69 310 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 ZNF347Q96SE7 839 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 RNF32Q9H0A6 362 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 DNAJB9Q9UBS3 223 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 ACAD8Q9UKU7 415 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 MAGED1Q9Y5V3 778 aaPredicted RBP22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 CACNA1GO43497 2377 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 CDH12P55289 794 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 TAS2R41P59536 307 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 SPIBQ01892 262 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 ARSKQ6UWY0 536 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 PLEKHM3Q6ZWE6 761 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 PACS2Q86VP3 889 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 SLC35B4Q969S0 331 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 PRRC1Q96M27 445 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 SDHAF3Q9NRP4 125 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 ACER3Q9NUN7 267 aa22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 TESQ9UGI8 421 aaKnown RBP22.51■■□□□ 1.19
LDLRAD3-203ENST00000528989 DEAF1O75398 565 aaPredicted RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms