RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SLCO1B7G3V0H7 640 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 SS18L1O75177 396 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-212ENST00000527887 AQP8O94778 261 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 AK1P00568 194 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 PLGP00747 810 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-212ENST00000527887 SLC1A6P48664 564 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ATP12AP54707 1039 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ABCE1P61221 599 aaKnown RBP12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ZAR1Q86SH2 424 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 GALNT10Q86SR1 603 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ZNF610Q8N9Z0 462 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 GATSQ8NAP1 163 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 CCDC197Q8NCU1 140 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 FBXO30Q8TB52 745 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 CDS1Q92903 461 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 RNF145Q96MT1 663 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 PIP5K1AQ99755 562 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ELAC2Q9BQ52 826 aaKnown RBP12.73□□□□□ -0.37
CAPN1-212ENST00000527887 C1orf50Q9BV19 199 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 DUSP26Q9BV47 211 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 OR10A4Q9H209 315 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 CXorf36Q9H7Y0 433 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 SLCO1B3Q9NPD5 702 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 GPATCH2Q9NW75 528 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 FBXO34Q9NWN3 711 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ARL2BPQ9Y2Y0 163 aa12.73□□□□□ -0.37
CAPN1-212ENST00000527887 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-212ENST00000527887 ZNF469Q96JG9 3925 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 PRRC2AP48634 2157 aaKnown RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 SHISA8B8ZZ34 492 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 EBAG9O00559 213 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 CFLARO15519 480 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 GMFGO60234 142 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 EIF4E2O60573 245 aaKnown RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 SKAP2O75563 359 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 C6orf47O95873 294 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 LINGO3P0C6S8 592 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 G6PDP11413 515 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 CD53P19397 219 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 EFNA1P20827 205 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 FPR1P21462 350 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 HOXC12P31275 282 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 ARRB2P32121 409 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 P2RX1P51575 399 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 CARD18P57730 90 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 ADAM8P78325 824 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 CTU2Q2VPK5 515 aaKnown RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 DCST2Q5T1A1 773 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 CCNJQ5T5M9 372 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 SHEQ5VZ18 495 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 HBMQ6B0K9 141 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 BEND4Q6ZU67 534 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 STK32CQ86UX6 486 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 LILRA2Q8N149 483 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 PHOSPHO1Q8TCT1 267 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 OIT3Q8WWZ8 545 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 PIGTQ969N2 578 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 SH3YL1Q96HL8 342 aaPredicted RBP12.72□□□□□ -0.37
CAPN1-212ENST00000527887 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 GP6Q9HCN6 339 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 KLHL28Q9NXS3 571 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 GIMAP2Q9UG22 337 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 DTNAQ9Y4J8 743 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 MPDZO75970 2070 aa12.72□□□□□ -0.37
CAPN1-212ENST00000527887 DEFB108AA8MXU0 73 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 NPIPB9F8W1W9 429 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 GTPBP1O00178 669 aaKnown RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 RNASET2O00584 256 aaKnown RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 CXCL13O43927 109 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 AGR2O95994 175 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 GUSBP08236 651 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 SLC6A8P48029 635 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 FOXD4Q12950 439 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 POU4F3Q15319 338 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 CD226Q15762 336 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 ZSCAN26Q16670 478 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 KRTAP21-3Q3LHN1 58 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 LRRC75A-AS1Q8N1F1 130 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 VPS37AQ8NEZ2 397 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 TOR1AIP2Q8NFQ8 470 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 OR8J2Q8NGG1 315 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 POC1BQ8TC44 478 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 PIWIL2Q8TC59 973 aaKnown RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 OSTF1Q92882 214 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 CPNE4Q96A23 557 aaPredicted RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 REXO5Q96IC2 774 aaKnown RBP12.71□□□□□ -0.37
CAPN1-212ENST00000527887 NMUR2Q9GZQ4 415 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 FAM107BQ9H098 131 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 ICAM5Q9UMF0 924 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 RAP2CQ9Y3L5 183 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 USH1CQ9Y6N9 552 aa12.71□□□□□ -0.37
CAPN1-212ENST00000527887 MED12LQ86YW9 2145 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 A0A0J9YW62 118 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 ZNF195O14628 629 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 TNFSF11O14788 317 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 ARHGEF9O43307 516 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 NUDT14O95848 222 aa12.7□□□□□ -0.38
CAPN1-212ENST00000527887 HBA1P69905 142 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms