RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.2□□□□□ -0.14
USH1C-207ENST00000527720 MUTYHQ9UIF7 546 aa14.2□□□□□ -0.14
USH1C-207ENST00000527720 PTP4A3O75365 173 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 CELP19835 753 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 TGM4P49221 684 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 EMDP50402 254 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 PPP3R1P63098 170 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 FOXK2Q01167 660 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 C1orf61Q13536 156 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.19□□□□□ -0.14
USH1C-207ENST00000527720 PDZK1Q5T2W1 519 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 AKAP14Q86UN6 197 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 OR51G2Q8NGK0 314 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 CNOT9Q92600 299 aaKnown RBP14.19□□□□□ -0.14
USH1C-207ENST00000527720 RIT1Q92963 219 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 TCTN2Q96GX1 697 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 RBM18Q96H35 190 aaKnown RBP14.19□□□□□ -0.14
USH1C-207ENST00000527720 ZNF578Q96N58 590 aaPredicted RBP14.19□□□□□ -0.14
USH1C-207ENST00000527720 LRRC61Q9BV99 259 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 NPAP1Q9NZP6 1156 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 GRIP1Q9Y3R0 1128 aa14.19□□□□□ -0.14
USH1C-207ENST00000527720 FAM183AA6NL82 134 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 PRR23D1E9PI22 279 aaPredicted RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 GABRPO00591 440 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 CASKO14936 926 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 PRR23D2P0DMB1 279 aaPredicted RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 SAGP10523 405 aaPredicted RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 PSMD4P55036 377 aaKnown RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 SCN1BQ07699 218 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 STX4Q12846 297 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 FAM53BQ14153 422 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ZNF141Q15928 474 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 DEFB110Q30KQ9 67 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ZNF791Q3KP31 576 aaPredicted RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 FAM131AQ6UXB0 335 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ZNF550Q7Z398 422 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ZAR1Q86SH2 424 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 CMIPQ8IY22 773 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ZFP41Q8N8Y5 198 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ATP6V1C2Q8NEY4 427 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 DIRAS2Q96HU8 199 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 VSTM2LQ96N03 204 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ORAI3Q9BRQ5 295 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 IFT27Q9BW83 186 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 MIR1-1HGQ9H1L0 117 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 RERGLQ9H628 205 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 MEPEQ9NQ76 525 aaPredicted RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 DNAJB12Q9NXW2 375 aaKnown RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 SLC35A3Q9Y2D2 325 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 SZT2Q5T011 3432 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 A0A1B0GWA3 101 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 FABP12A6NFH5 140 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 C12orf71A8MTZ7 269 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 B4DGG1 531 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 SEC14L5O43304 696 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 IL7P13232 177 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 CD53P19397 219 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 PTNP21246 168 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 ACAA2P42765 397 aaKnown RBP14.18□□□□□ -0.14
USH1C-207ENST00000527720 CAPZA2P47755 286 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 FASLGP48023 281 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 FZD5Q13467 585 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 SYT13Q7L8C5 426 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 FRMD1Q8N878 549 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 SYT14Q8NB59 555 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 IL17RDQ8NFM7 739 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 OR13C2Q8NGS9 318 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 OTULINQ96BN8 352 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 G6PC3Q9BUM1 346 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 FLRT3Q9NZU0 649 aa14.18□□□□□ -0.14
USH1C-207ENST00000527720 A0A0A6YYC8 382 aaPredicted RBP14.17□□□□□ -0.14
USH1C-207ENST00000527720 SLC9B1P1A6NJY1 282 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 RIIAD1A6NNX1 92 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 I3L1I5 382 aaPredicted RBP14.17□□□□□ -0.14
USH1C-207ENST00000527720 CLDN4O14493 209 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 PRAMEF2O60811 474 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 NSA2O95478 260 aaKnown RBP14.17□□□□□ -0.14
USH1C-207ENST00000527720 FUT1P19526 365 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 PTBP1P26599 531 aaKnown RBP eCLIP14.17□□□□□ -0.14
USH1C-207ENST00000527720 TPTEP56180 551 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 SELENBP1Q13228 472 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 GALEQ14376 348 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 FGFBP1Q14512 234 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 ZMAT1Q5H9K5 638 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 VASNQ6EMK4 673 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 METAP1DQ6UB28 335 aaPredicted RBP14.17□□□□□ -0.14
USH1C-207ENST00000527720 LINC00114Q6XXX2 140 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 THSD4Q6ZMP0 1018 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 SLC37A3Q8NCC5 494 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 OR6C4Q8NGE1 309 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 OR4C6Q8NH72 309 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 SLC2A12Q8TD20 617 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 KISS1RQ969F8 398 aaPredicted RBP14.17□□□□□ -0.14
USH1C-207ENST00000527720 LRFN5Q96NI6 719 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 ALG8Q9BVK2 526 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 TMED9Q9BVK6 235 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 ENKD1Q9H0I2 346 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 KCNN2Q9H2S1 579 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 TBC1D17Q9HA65 648 aa14.17□□□□□ -0.14
USH1C-207ENST00000527720 BABAM2Q9NXR7 383 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms