RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 RP9Q8TA86 221 aaKnown RBP15.61■□□□□ 0.09
LMX1B-203ENST00000526117 BBS10Q8TAM1 723 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 GPR119Q8TDV5 335 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 ITLN2Q8WWU7 325 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-203ENST00000526117 SLC35B4Q969S0 331 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 TMEM19Q96HH6 336 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 SH3YL1Q96HL8 342 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-203ENST00000526117 TTYH2Q9BSA4 534 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 CCDC106Q9BWC9 280 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 SPATA9Q9BWV2 254 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 CALHM2Q9HA72 323 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 STOML1Q9UBI4 398 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 TNFRSF10DQ9UBN6 386 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 SH3BGRL2Q9UJC5 107 aa15.61■□□□□ 0.09
LMX1B-203ENST00000526117 GPC6Q9Y625 555 aaPredicted RBP15.61■□□□□ 0.09
LMX1B-203ENST00000526117 FXYD1O00168 92 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 FAAHO00519 579 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 OIP5O43482 229 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 ZG16O60844 167 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 FREM3P0C091 2139 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 RNF224P0DH78 156 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 PLAURQ03405 335 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 ADRM1Q16186 407 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 RIPPLY2Q5TAB7 128 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 RNF220Q5VTB9 566 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 NSUN5P2Q63ZY6 315 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 REP15Q6BDI9 236 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 ZNF585AQ6P3V2 769 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 SERPINA11Q86U17 422 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 SNX32Q86XE0 403 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 LACC1Q8IV20 430 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 PCYOX1LQ8NBM8 494 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 OR8J3Q8NGG0 315 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 WDR60Q8WVS4 1066 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 ST8SIA1Q92185 356 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 MRGPRX4Q96LA9 322 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 SH3GL1Q99961 368 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 KAT8Q9H7Z6 458 aaKnown RBP15.6■□□□□ 0.09
LMX1B-203ENST00000526117 RPH3AQ9Y2J0 694 aaPredicted RBP15.6■□□□□ 0.09
LMX1B-203ENST00000526117 IFT52Q9Y366 437 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 ZNF337Q9Y3M9 751 aa15.6■□□□□ 0.09
LMX1B-203ENST00000526117 PHF3Q92576 2039 aaKnown RBP15.6■□□□□ 0.09
LMX1B-203ENST00000526117 MRASO14807 208 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 SHOX2O60902 331 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-203ENST00000526117 PGM3O95394 542 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 NUDT7P0C024 238 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 GLI4P10075 376 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 IL7RP16871 459 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 PRKCAP17252 672 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 PGCP20142 388 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 TIMP3P35625 211 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 SLC6A8P48029 635 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 EEFSECP57772 596 aaKnown RBP15.59■□□□□ 0.09
LMX1B-203ENST00000526117 SF3A3Q12874 501 aaKnown RBP eCLIP15.59■□□□□ 0.09
LMX1B-203ENST00000526117 MMEL1Q495T6 779 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 LIN52Q52LA3 116 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 REEP3Q6NUK4 255 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 MTDHQ86UE4 582 aaKnown RBP15.59■□□□□ 0.09
LMX1B-203ENST00000526117 SLC30A8Q8IWU4 369 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 ZNF440Q8IYI8 595 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 C10orf111Q8N326 155 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 ANKS4BQ8N8V4 417 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 LRRC58Q96CX6 371 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 QRSL1Q9H0R6 528 aaKnown RBP15.59■□□□□ 0.09
LMX1B-203ENST00000526117 GID8Q9NWU2 228 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 CAMK2AQ9UQM7 478 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 VDAC3Q9Y277 283 aa15.59■□□□□ 0.09
LMX1B-203ENST00000526117 USP9YO00507 2555 aaPredicted RBP15.59■□□□□ 0.09
LMX1B-203ENST00000526117 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 CDHR4A6H8M9 788 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 MBD3L4A6NDZ8 208 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 MBD3L3A6NE82 208 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 MBD3L5A6NJ08 208 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 UBTFL6P0CB48 400 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 POU3F2P20265 443 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 PRDX6P30041 224 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 NUP107P57740 925 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 RAC1P63000 192 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 EEF1A1P68104 462 aaKnown RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 CDK6Q00534 326 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 ART3Q13508 389 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 LARS2Q15031 903 aaKnown RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 NDUFAF6Q330K2 333 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 NANOGP8Q6NSW7 305 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 C3P1Q6ZMU1 363 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 RPRMLQ8N4K4 120 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 MEIOBQ8N635 442 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 OR52P1PQ8NH57 321 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 MBD3L2Q8NHZ7 208 aaPredicted RBP15.58■□□□□ 0.08
LMX1B-203ENST00000526117 POC1BQ8TC44 478 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 ASB5Q8WWX0 329 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 TMEM234Q8WY98 164 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 RND1Q92730 232 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 MAL2Q969L2 176 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 RNF145Q96MT1 663 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 KLHDC3Q9BQ90 382 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 FAM107BQ9H098 131 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 ARMC7Q9H6L4 198 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 NANOGQ9H9S0 305 aa15.58■□□□□ 0.08
LMX1B-203ENST00000526117 DNAJB12Q9NXW2 375 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms