RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 ETV2O00321 342 aaPredicted RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 DYNC1I1O14576 645 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 EFNA2O43921 213 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 CSTAP01040 98 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 SNRPB2P08579 225 aaKnown RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 UBL4AP11441 157 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 GPX2P18283 190 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 RPS4Y1P22090 263 aaKnown RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 COL8A1P27658 744 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 ADH6P28332 368 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 PGM1P36871 562 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 EIF1P41567 113 aaKnown RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 RNF144AP50876 292 aaPredicted RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 ZNF41P51814 821 aaPredicted RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 EEFSECP57772 596 aaKnown RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 RAC1P63000 192 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 KCNJ10P78508 379 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 FADDQ13158 208 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 SKP2Q13309 424 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 HSPB2Q16082 182 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 NDUFAF6Q330K2 333 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 RUNDC3AQ59EK9 446 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 SLC25A53Q5H9E4 307 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 HIST2H2BCQ6DN03 193 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 POMZP3Q6PJE2 187 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 EIF3MQ7L2H7 374 aaKnown RBP11.68□□□□□ -0.54
CTSB-209ENST00000525315 ZNF614Q8N883 585 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 FAM71CQ8NEG0 241 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 TNIP2Q8NFZ5 429 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 OR5W2Q8NH69 310 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 CA5BP1Q8WTZ4 195 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 TRIB1Q96RU8 372 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 SAR1AQ9NR31 198 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 CALML5Q9NZT1 146 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 STOML1Q9UBI4 398 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 P2RX2Q9UBL9 471 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 SLC35A3Q9Y2D2 325 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 NDUFAF1Q9Y375 327 aa11.68□□□□□ -0.54
CTSB-209ENST00000525315 DSPPQ9NZW4 1301 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 A0A0G2JPF8 293 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 CLCA1A8K7I4 914 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 HNRNPCL2B2RXH8 293 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 HNRNPCL3B7ZW38 293 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 PRSS44E7EML9 344 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 H0Y3Z8 333 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 HNRNPCL1O60812 293 aaKnown RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 RCBTB2O95199 551 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 NTN1O95631 604 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 IL2RAP01589 272 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 HNRNPCL4P0DMR1 293 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 POU3F2P20265 443 aaPredicted RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 PPIBP23284 216 aaKnown RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 GRNP28799 593 aaKnown RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 ADSLP30566 484 aaPredicted RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 CLDN20P56880 219 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 HPCAP84074 193 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 CBFBQ13951 182 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 GNA13Q14344 377 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 TOMM34Q15785 309 aaPredicted RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 PRAMEF8Q5VWM4 474 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 PRAMEF7Q5VXH5 474 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 LIX1LQ8IVB5 337 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 CMIPQ8IY22 773 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 MEIOBQ8N635 442 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 C10orf82Q8WW14 230 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 WNT2BQ93097 391 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 RNF145Q96MT1 663 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 THUMPD3Q9BV44 507 aaKnown RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 QRSL1Q9H0R6 528 aaKnown RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 BCL2L10Q9HD36 194 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 A4GALTQ9NPC4 353 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 CHST11Q9NPF2 352 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 CLCF1Q9UBD9 225 aa11.67□□□□□ -0.54
CTSB-209ENST00000525315 ZNF629Q9UEG4 869 aaPredicted RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 GPC6Q9Y625 555 aaPredicted RBP11.67□□□□□ -0.54
CTSB-209ENST00000525315 CENPEQ02224 2701 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 EVPLLA8MZ36 301 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 H0YC42 278 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 H3BML4 177 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 ADAMDEC1O15204 470 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 BCAS1O75363 584 aaPredicted RBP11.66□□□□□ -0.54
CTSB-209ENST00000525315 NUDT14O95848 222 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 DBIP07108 87 aaKnown RBP11.66□□□□□ -0.54
CTSB-209ENST00000525315 NUDT7P0C024 238 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 UBTFL6P0CB48 400 aaPredicted RBP11.66□□□□□ -0.54
CTSB-209ENST00000525315 PRKCAP17252 672 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 CRISP3P54108 245 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 TPD52P55327 224 aaPredicted RBP11.66□□□□□ -0.54
CTSB-209ENST00000525315 DLX5P56178 289 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 PLAURQ03405 335 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 TFF3Q07654 80 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 SF3A3Q12874 501 aaKnown RBP eCLIP11.66□□□□□ -0.545e-6■■■■■ 39.5
CTSB-209ENST00000525315 KLF10Q13118 480 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 GGNQ86UU5 652 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 METTL25Q8N6Q8 603 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 C9orf106Q8NAJ2 232 aa11.66□□□□□ -0.54
CTSB-209ENST00000525315 NAXEQ8NCW5 288 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms