RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 LYNX1G3V0Z9 82 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 ZNF195O14628 629 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 DNALI1O14645 258 aaPredicted RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 PIAS1O75925 651 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 PDE5AO76074 875 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 PSMG1O95456 288 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 OXSR1O95747 527 aaPredicted RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 ITGA5P08648 1049 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 OR4A8P0C604 315 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 LYNX1P0DP58 116 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 STMN1P16949 149 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 TRA2BP62995 288 aaKnown RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 SAMD14Q8IZD0 417 aaPredicted RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 FAM9CQ8IZT9 166 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 ZCCHC24Q8N2G6 241 aaKnown RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 OR4C3Q8NH37 302 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 OR51F2Q8NH61 342 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 MRGPRX4Q96LA9 322 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 GPR22Q99680 433 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 C1QTNF5Q9BXJ0 243 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 ACSS1Q9NUB1 689 aaPredicted RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 NSMCE4AQ9NXX6 385 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 SENP1Q9P0U3 644 aa12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 C19orf53Q9UNZ5 99 aaPredicted RBP12.04□□□□□ -0.48
NKX3-1-202ENST00000523261 WNK2Q9Y3S1 2297 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 TRAV20A0A0B4J274 112 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 A0A1W2PNR3 127 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 GXYLT2A0PJZ3 443 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 NGFRP08138 427 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 NUDT17P0C025 328 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 GCH1P30793 250 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 GP5P40197 560 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 PRIM2P49643 509 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 IL13RA1P78552 427 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 ILF2Q12905 390 aaKnown RBP12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 GLE1Q53GS7 698 aaKnown RBP12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 PDIK1LQ8N165 341 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 BAG1Q99933 345 aaPredicted RBP12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 LMF2Q9BU23 707 aaKnown RBP12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 RACGAP1Q9H0H5 632 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 NARFLQ9H6Q4 476 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 G6PC2Q9NQR9 355 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 SLC17A5Q9NRA2 495 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 MALT1Q9UDY8 824 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 FBXO9Q9UK97 447 aaPredicted RBP12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 SLC12A4Q9UP95 1085 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 AMDHD2Q9Y303 409 aa12.03□□□□□ -0.48
NKX3-1-202ENST00000523261 KIF2AO00139 706 aaPredicted RBP12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 PDLIM1O00151 329 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 OR7A17O14581 309 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 ESRRBO95718 433 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 TFP02787 698 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 ERCC1P07992 297 aaPredicted RBP12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 IL3P08700 152 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 IGFBP1P08833 259 aaPredicted RBP12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 GAAP10253 952 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 MPIP34949 423 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC29A2Q14542 456 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 TRADDQ15628 312 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 ZNHIT3Q15649 155 aaPredicted RBP12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 PFKFB4Q16877 469 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 SGO1Q5FBB7 561 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 CARM1Q86X55 608 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 ANKMY2Q8IV38 441 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 C17orf78Q8N4C9 275 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 C1orf52Q8N6N3 182 aaKnown RBP12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 ATP6V1C2Q8NEY4 427 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 B4GALNT2Q8NHY0 566 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 FBXO27Q8NI29 283 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 APH1AQ96BI3 265 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 LRRC39Q96DD0 335 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 TMPRSS13Q9BYE2 586 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 NTN4Q9HB63 628 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 NMRAL1Q9HBL8 299 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC35C2Q9NQQ7 365 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
NKX3-1-202ENST00000523261 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 ESPNB1AK53 854 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 UPK1AO00322 258 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 WNT9BO14905 357 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 KCNH1O95259 989 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 ADRA2CP18825 462 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 PRTN3P24158 256 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 SLC7A1P30825 629 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 NTF4P34130 210 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 GABRA3P34903 492 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 RBMXP38159 391 aaKnown RBP12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 ALDH18A1P54886 795 aaKnown RBP12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 CD226Q15762 336 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 TSNAXIP1Q2TAA8 658 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 TTC19Q6DKK2 380 aaPredicted RBP12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 TMEM107Q6UX40 140 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 PIK3R3Q92569 461 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 DOK1Q99704 481 aa12.01□□□□□ -0.49
NKX3-1-202ENST00000523261 MMP27Q9H306 513 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms